ICML 2025 论文列表

International Conference on Machine Learning

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3,342篇论文

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主题: 应用 · chemistry physics and earth sciences · 287 篇论文 · 重置筛选

Speculative Prefill: Turbocharging TTFT with Lightweight and Training-Free Token Importance Estimation

Jingyu Liu, Beidi Chen, Ce Zhang

展开摘要

Improving time-to-first-token (TTFT) is an essentially important objective in modern large language model (LLM) inference engines. Optimizing TTFT directly results in higher maximal QPS and meets the requirements of many critical applications. However, boosting TTFT is notoriously challenging since it is compute-bounded and the performance bottleneck shifts from the self-attention that many prior works focus on to the MLP part. In this work, we present SpecPrefill, a training free framework that accelerates the inference TTFT for both long and medium context queries based on the following insight: LLMs are generalized enough to preserve the quality given only a carefully chosen subset of prompt tokens. At its core, SpecPrefill leverages a lightweight model to speculate locally important tokens based on the context. These tokens, along with the necessary positional information, are then sent to the main model for processing. We evaluate SpecPrefill with a diverse set of tasks, followed by a comprehensive benchmarking of performance improvement both in a real end-to-end setting and ablation studies. SpecPrefill manages to serve Llama-3.1-405B-Instruct-FP8 with up to 7$\times$ maximal end-to-end QPS on real downstream tasks and 7.66$\times$ TTFT improvement.

Poster
CoCoA-Mix: Confusion-and-Confidence-Aware Mixture Model for Context Optimization

Dasol Hong, Wooju Lee, Hyun Myung

展开摘要

Prompt tuning, which adapts vision-language models by freezing model parameters and opti- mizing only the prompt, has proven effective for task-specific adaptations. The core challenge in prompt tuning is improving specialization for a specific task and generalization for unseen domains. However, frozen encoders often produce misaligned features, leading to confusion between classes and limiting specialization. To overcome this issue, we propose a confusion-aware loss (CoA-loss) that improves specialization by refining the decision boundaries between confusing classes. Additionally, we mathematically demonstrate that a mixture model can enhance generalization without compromising specialization. This is achieved using confidence-aware weights (CoA- weights), which adjust the weights of each prediction in the mixture model based on its confidence within the class domains. Extensive experiments show that CoCoA-Mix, a mixture model with CoA-loss and CoA-weights, outperforms state-of-the-art methods by enhancing specialization and generalization. Our code is publicly available at https://github.com/url-kaist/CoCoA-Mix

Poster
Intersectional Fairness in Reinforcement Learning with Large State and Constraint Spaces

ERIC EATON, Marcel Hussing, Michael Kearns, Aaron Roth, Sikata Bela Sengupta, Jessica Sorrell

展开摘要

In traditional reinforcement learning (RL), the learner aims to solve a single objective optimization problem: find the policy that maximizes expected reward. However, in many real-world settings, it is important to optimize over multiple objectives simultaneously. For example, when we are interested in fairness, states might have feature annotations corresponding to multiple (intersecting) demographic groups to whom reward accrues, and our goal might be to maximize the reward of the group receiving the minimal reward. In this work, we consider a multi-objective optimization problem in which each objective is defined by a state-based reweighting of a single scalar reward function. This generalizes the problem of maximizing the reward of the minimum reward group. We provide oracle-efficient algorithms to solve these multi-objective RL problems even when the number of objectives is very large --- for tabular MDPs, as well as for large MDPs when the group functions have additional structure. The contribution of this paper is that we are able to solve this class of multi-objective RL problems with a possibly *exponentially* large class of constraints over intersecting groups in both tabular and large state space MDPs in an oracle-efficient manner. Finally, we experimentally validate our theoretical results and demonstrate applications on a preferential attachment graph MDP.

Poster
Efficient Noise Calculation in Deep Learning-based MRI Reconstructions

Onat Dalmaz, Arjun D Desai, Reinhard Heckel, Tolga Cukur, Akshay S Chaudhari, Brian Hargreaves

展开摘要

Accelerated MRI reconstruction involves solving an ill-posed inverse problem where noise in acquired data propagates to the reconstructed images. Noise analyses are central to MRI reconstruction for providing an explicit measure of solution fidelity and for guiding the design and deployment of novel reconstruction methods. However, deep learning (DL)-based reconstruction methods have often overlooked noise propagation due to inherent analytical and computational challenges, despite its critical importance. This work proposes a theoretically grounded, memory-efficient technique to calculate *voxel-wise variance* for quantifying uncertainty due to acquisition noise in accelerated MRI reconstructions. Our approach is based on approximating the noise covariance using the DL network's Jacobian, which is intractable to calculate. To circumvent this, we derive an *unbiased estimator* for the diagonal of this covariance matrix—voxel-wise variance—, and introduce a Jacobian sketching technique to efficiently implement it. We evaluate our method on knee and brain MRI datasets for both data-driven and physics-driven networks trained in supervised and unsupervised manners. Compared to empirical references obtained via Monte-Carlo simulations, our technique achieves near-equivalent performance while reducing computational and memory demands by an order of magnitude or more. Furthermore, our method is robust across varying input noise levels, acceleration factors, and diverse undersampling schemes, highlighting its broad applicability. Our work *reintroduces* accurate and efficient noise analysis as a central tenet of reconstruction algorithms, holding promise to reshape how we evaluate and deploy DL-based MRI.

Poster
An in depth look at the Procrustes-Wasserstein distance: properties and barycenters

Davide Adamo, Marco Corneli, Manon Vuillien, Emmanuelle Vila

展开摘要

Due to its invariance to rigid transformations such as rotations and reflections, Procrustes-Wasserstein (PW) was introduced in the literature as an optimal transport (OT) distance, alternative to Wasserstein and more suited to tasks such as the alignment and comparison of point clouds. Having that application in mind, we carefully build a space of discrete probability measures and show that over that space PW actually *is* a distance. Algorithms to solve the PW problems already exist, however we extend the PW framework by discussing and testing several initialization strategies. We then introduce the notion of PW barycenter and detail an algorithm to estimate it from the data. The result is a new method to compute representative shapes from a collection of point clouds. We benchmark our method against existing OT approaches, demonstrating superior performance in scenarios requiring precise alignment and shape preservation. We finally show the usefulness of the PW barycenters in an archaeological context. Our results highlight the potential of PW in advancing 2D and 3D point cloud analysis for machine learning and computational geometry applications.

Poster
Discrete Markov Probabilistic Models: An Improved Discrete Score-Based Framework with sharp convergence bounds under minimal assumptions

Le-Tuyet-Nhi PHAM, Dario Shariatian, Antonio Ocello, Giovanni Conforti, Alain Oliviero Durmus

展开摘要

This paper introduces the Discrete Markov Probabilistic Model (DMPM), a novel algorithm for discrete data generation. The algorithm operates in discrete space, where the noising process is a continuous-time Markov chain that can be sampled exactly via a Poissonian clock that flips labels uniformly at random. The time-reversal process, like the forward noise process, is a jump process, with its intensity governed by a discrete analogue of the classical score function. Crucially, this intensity is proven to be the conditional expectation of a function of the forward process, strengthening its theoretical alignment with score-based generative models while ensuring robustness and efficiency. We further establish convergence bounds for the algorithm under minimal assumptions and demonstrate its effectiveness through experiments on low-dimensional Bernoulli-distributed datasets and high-dimensional binary MNIST data. The results highlight its strong performance in generating discrete structures. This work bridges theoretical foundations and practical applications, advancing the development of effective and theoretically grounded discrete generative modeling.

Poster
Asymmetric Decision-Making in Online Knowledge Distillation: Unifying Consensus and Divergence

Zhaowei Chen, Borui Zhao, Yuchen Ge, Yuhao Chen, Renjie Song, Jiajun Liang

展开摘要

Online Knowledge Distillation (OKD) methods represent a streamlined, one-stage distillation training process that obviates the necessity of transferring knowledge from a pretrained teacher network to a more compact student network. In contrast to existing logits-based OKD methods, this paper presents an innovative approach to leverage intermediate spatial representations. Our analysis of the intermediate features from both teacher and student models reveals two pivotal insights: (1) the similar features between students and teachers are predominantly focused on the foreground objects. (2) teacher models emphasize foreground objects more than students. Building on these findings, we propose Asymmetric Decision-Making (ADM) to enhance feature consensus learning for student models while continuously promoting feature diversity in teacher models. Specifically, Consensus Learning for student models prioritizes spatial features with high consensus relative to teacher models. Conversely, Divergence Learning for teacher models highlights spatial features with lower similarity compared to student models, indicating superior performance by teacher models in these regions. Consequently, ADM facilitates the student models to catch up with the feature learning process of the teacher models. Extensive experiments demonstrate that ADM consistently surpasses existing OKD methods across various online knowledge distillation settings and also achieves superior results when transferred to offline knowledge distillation, semantic segmentation and diffusion distillation tasks.

Poster
Tensor-Var: Efficient Four-Dimensional Variational Data Assimilation

Yiming Yang, Xiaoyuan Cheng, Daniel Giles, Sibo Cheng, Yi He, Xiao Xue, Boli Chen, Yukun Hu

展开摘要

Variational data assimilation estimates the dynamical system states by minimizing a cost function that fits the numerical models with the observational data. Although four-dimensional variational assimilation (4D-Var) is widely used, it faces high computational costs in complex nonlinear systems and depends on imperfect state-observation mappings. Deep learning (DL) offers more expressive approximators, while integrating DL models into 4D-Var is challenging due to their nonlinearities and lack of theoretical guarantees in assimilation results. In this paper, we propose \textit{Tensor-Var}, a novel framework that integrates kernel conditional mean embedding (CME) with 4D-Var to linearize nonlinear dynamics, achieving convex optimization in a learned feature space. Moreover, our method provides a new perspective for solving 4D-Var in a linear way, offering theoretical guarantees of consistent assimilation results between the original and feature spaces. To handle large-scale problems, we propose a method to learn deep features (DFs) using neural networks within the Tensor-Var framework. Experiments on chaotic systems and global weather prediction with real-time observations show that Tensor-Var outperforms conventional and DL hybrid 4D-Var baselines in accuracy while achieving a 10- to 20-fold speed improvement.

Poster
A Machine Learning Approach to Duality in Statistical Physics

Prateek Gupta, Andrea E. V. Ferrari, Nabil Iqbal

展开摘要

The notion of duality -- that a given physical system can have two different mathematical descriptions -- is a key idea in modern theoretical physics. Establishing a duality in lattice statistical mechanics models requires the construction of a dual Hamiltonian and a map from the original to the dual observables. By using neural networks to parameterize these maps and introducing a loss function that penalises the difference between correlation functions in original and dual models, we formulate the process of duality discovery as an optimization problem. We numerically solve this problem and show that our framework can rediscover the celebrated Kramers-Wannier duality for the 2d Ising model, numerically reconstructing the known mapping of temperatures. We further investigate the 2d Ising model deformed by a plaquette coupling and find families of ``approximate duals''. We discuss future directions and prospects for discovering new dualities within this framework.

Poster
Near-optimal Sketchy Natural Gradients for Physics-Informed Neural Networks

Maricela Best Mckay, Avleen Kaur, Chen Greif, Brian Wetton

展开摘要

Natural gradient methods for PINNs have achieved state-of-the-art performance with errors several orders of magnitude smaller than those achieved by standard optimizers such as ADAM or L-BFGS. However, computing natural gradients for PINNs is prohibitively computationally costly and memory-intensive for all but small neural network architectures. We develop a randomized algorithm for natural gradient descent for PINNs that uses sketching to approximate the natural gradient descent direction. We prove that the change of coordinate Gram matrix used in a natural gradient descent update has rapidly-decaying eigenvalues for a one-layer, one-dimensional neural network and empirically demonstrate that this structure holds for four different example problems. Under this structure, our sketching algorithm is guaranteed to provide a near-optimal low-rank approximation of the Gramian. Our algorithm dramatically speeds up computation time and reduces memory overhead. Additionally, in our experiments, the sketched natural gradient outperforms the original natural gradient in terms of accuracy, often achieving an error that is an order of magnitude smaller. Training time for a network with around 5,000 parameters is reduced from several hours to under two minutes. Training can be practically scaled to large network sizes; we optimize a PINN for a network with over a million parameters within a few minutes, a task for which the full Gram matrix does not fit in memory.

Poster
Piloting Structure-Based Drug Design via Modality-Specific Optimal Schedule

Keyue Qiu, Yuxuan Song, Zhehuan Fan, Peidong Liu, Zhe Zhang, Mingyue Zheng, Hao Zhou, Wei-Ying Ma

展开摘要

Structure-Based Drug Design (SBDD) is crucial for identifying bioactive molecules. Recent deep generative models are faced with challenges in geometric structure modeling. A major bottleneck lies in the twisted probability path of multi-modalities—continuous 3D positions and discrete 2D topologies—which jointly determine molecular geometries. By establishing the fact that noise schedules decide the Variational Lower Bound (VLB) for the twisted probability path, we propose VLB-Optimal Scheduling (VOS) strategy in this under-explored area, which optimizes VLB as a path integral for SBDD. Our model effectively enhances molecular geometries and interaction modeling, achieving state-of-the-art PoseBusters passing rate of 95.9\% on CrossDock, more than 10\% improvement upon strong baselines, while maintaining high affinities and robust intramolecular validity evaluated on held-out test set. Code is available at https://github.com/AlgoMole/MolCRAFT.

Poster
Otter: Generating Tests from Issues to Validate SWE Patches

Toufique Ahmed, Jatin Ganhotra, Rangeet Pan, Avraham Shinnar, Saurabh Sinha, Martin Hirzel

展开摘要

While there has been plenty of work on generating tests from existing code, there has been limited work on generating tests from issues. A correct test must validate the code patch that resolves the issue. This paper focuses on the scenario where that code patch does not yet exist. Doing so supports two major use-cases. First, it supports TDD (test-driven development), the discipline of "test first, write code later" that has well-documented benefits for human software engineers. Second, it also validates SWE (software engineering) agents, which generate code patches for resolving issues. This paper introduces TDD-Bench-Verified, a benchmark for generating tests from issues, and Otter, an LLM-based solution for this task. Otter augments LLMs with rule-based analysis to check and repair their outputs, and introduces a novel self-reflective action planner. Experiments show Otter outperforming state-of-the-art systems for generating tests from issues, in addition to enhancing systems that generate patches from issues. We hope that Otter helps make developers more productive at resolving issues and leads to more robust, well-tested code.

Poster
On Zero-Initialized Attention: Optimal Prompt and Gating Factor Estimation

Nghiem Tuong Diep, Huy Nguyen, Chau Nguyen, Minh Le, Duy Minh Ho Nguyen, Daniel Sonntag, Mathias Niepert, Nhat Ho

展开摘要

LLaMA-Adapter has recently emerged as an efficient fine-tuning technique for LLaMA models, leveraging zero-initialized attention to stabilize training and enhance performance. However, despite its empirical success, the theoretical foundations of zero-initialized attention remain largely unexplored. In this paper, we provide a rigorous theoretical analysis, establishing a connection between zero-initialized attention and mixture-of-expert models. We prove that both linear and non-linear prompts, along with gating functions, can be optimally estimated, with non-linear prompts offering greater flexibility for future applications. Empirically, we validate our findings on the open LLM benchmarks, demonstrating that non-linear prompts outperform linear ones. Notably, even with limited training data, both prompt types consistently surpass vanilla attention, highlighting the robustness and adaptability of zero-initialized attention.

Poster
Unveiling AI's Blind Spots: An Oracle for In-Domain, Out-of-Domain, and Adversarial Errors

Shuangpeng Han, Mengmi Zhang

展开摘要

AI models make mistakes when recognizing images—whether in-domain, out-of-domain, or adversarial. Predicting these errors is critical for improving system reliability, reducing costly mistakes, and enabling proactive corrections in real-world applications such as healthcare, finance, and autonomous systems. However, understanding what mistakes AI models make, why they occur, and how to predict them remains an open challenge. Here, we conduct comprehensive empirical evaluations using a "mentor" model—a deep neural network designed to predict another "mentee" model’s errors. Our findings show that the mentor excels at learning from a mentee's mistakes on adversarial images with small perturbations and generalizes effectively to predict in-domain and out-of-domain errors of the mentee. Additionally, transformer-based mentor models excel at predicting errors across various mentee architectures. Subsequently, we draw insights from these observations and develop an "oracle" mentor model, dubbed SuperMentor, that can outperform baseline mentors in predicting errors across different error types from the ImageNet-1K dataset. Our framework paves the way for future research on anticipating and correcting AI model behaviors, ultimately increasing trust in AI systems. Our data and code are available at [here](https://github.com/ZhangLab-DeepNeuroCogLab/UnveilAIBlindSpot).

Poster
AtlasD: Automatic Local Symmetry Discovery

Manu Bhat, JongHyun Park, Jianke Yang, Nima Dehmamy, Robin Walters, Rose Yu

展开摘要

Existing symmetry discovery methods predominantly focus on global transformations across the entire system or space, but they fail to consider the symmetries in local neighborhoods. This may result in the reported symmetry group being a misrepresentation of the true symmetry. In this paper, we formalize the notion of local symmetry as atlas equivariance. Our proposed pipeline, automatic local symmetry discovery (AtlasD), recovers the local symmetries of a function by training local predictor networks and then learning a Lie group basis to which the predictors are equivariant. We demonstrate AtlasD is capable of discovering local symmetry groups with multiple connected components in top-quark tagging and partial differential equation experiments. The discovered local symmetry is shown to be a useful inductive bias that improves the performance of downstream tasks in climate segmentation and vision tasks. Our code is publicly available at https://github.com/Rose-STL-Lab/AtlasD.

Poster
Physics Aware Neural Networks for Unsupervised Binding Energy Prediction

Ke Liu, Hao Chen, Chunhua Shen

展开摘要

Developing models for protein-ligand interactions holds substantial significance for drug discovery. Supervised methods often failed due to the lack of labeled data for predicting the protein-ligand binding energy, like antibodies. Therefore, unsupervised approaches are urged to make full use of the unlabeled data. To tackle the problem, we propose an efficient, unsupervised protein-ligand binding energy prediction model via the conservation of energy (CEBind), which follows the physical laws. Specifically, given a protein-ligand complex, we randomly sample forces for each atom in the ligand. Then these forces are applied rigidly to the ligand to perturb its position, following the law of rigid body dynamics. Finally, CEBind predicts the energy of both the unperturbed complex and the perturbed complex. The energy gap between two complexes equals the work of the outer forces, following the law of conservation of energy. Extensive experiments are conducted on the unsupervised protein-ligand binding energy prediction benchmarks, comparing them with previous works. Empirical results and theoretic analysis demonstrate that CEBind is more efficient and outperforms previous unsupervised models on benchmarks.

Poster
Flow-field inference from neural data using deep recurrent networks

Timothy Doyeon Kim, Thomas Zhihao Luo, Tankut Can, Kamesh Krishnamurthy, Jonathan W. Pillow, Carlos D Brody

展开摘要

Neural computations underlying processes such as decision-making, working memory, and motor control are thought to emerge from neural population dynamics. But estimating these dynamics remains a significant challenge. Here we introduce Flow-field Inference from Neural Data using deep Recurrent networks (FINDR), an unsupervised deep learning method for inferring low-dimensional, nonlinear, stochastic dynamics underlying neural population activity. Using spike train data from frontal brain regions of rats performing an auditory decision-making task, we demonstrate that FINDR performs competitively with existing methods in capturing the heterogeneous responses of individual neurons. When trained to disentangle task-relevant and irrelevant activity, FINDR uncovers interpretable low-dimensional dynamics. These dynamics can be visualized as flow fields and attractors, enabling direct tests of attractor-based theories of neural computation. We suggest FINDR as a powerful method for revealing the low-dimensional task-relevant dynamics of neural populations and their associated computations.

Poster
Refined generalization analysis of the Deep Ritz Method and Physics-Informed Neural Networks

Xianliang Xu, Ye Li, Zhongyi Huang

展开摘要

In this paper, we derive refined generalization bounds for the Deep Ritz Method (DRM) and Physics-Informed Neural Networks (PINNs). For the DRM, we focus on two prototype elliptic partial differential equations (PDEs): Poisson equation and static Schrödinger equation on the $d$-dimensional unit hypercube with the Neumann boundary condition. Furthermore, sharper generalization bounds are derived based on the localization techniques under the assumptions that the exact solutions of the PDEs lie in the Barron spaces or the general Sobolev spaces. For the PINNs, we investigate the general linear second order elliptic PDEs with Dirichlet boundary condition using the local Rademacher complexity in the multi-task learning setting. Finally, we discuss the generalization error in the setting of over-parameterization when solutions of PDEs belong to Barron space.

Poster
Calibrated Physics-Informed Uncertainty Quantification

Vignesh Gopakumar, Ander Gray, Lorenzo Zanisi, Timothy Nunn, Daniel Giles, Matt Kusner, Stanislas Pamela, Marc Peter Deisenroth

展开摘要

Simulating complex physical systems is crucial for understanding and predicting phenomena across diverse fields, such as fluid dynamics and heat transfer, as well as plasma physics and structural mechanics. Traditional approaches rely on solving partial differential equations (PDEs) using numerical methods, which are computationally expensive and often prohibitively slow for real-time applications or large-scale simulations. Neural PDEs have emerged as efficient alternatives to these costly numerical solvers, offering significant computational speed-ups. However, their lack of robust uncertainty quantification (UQ) limits deployment in critical applications. We introduce a model-agnostic, physics-informed conformal prediction (CP) framework that provides guaranteed uncertainty estimates without requiring labelled data. By utilising a physics-based approach, we can quantify and calibrate the model's inconsistencies with the physics rather than the uncertainty arising from the data. Our approach utilises convolutional layers as finite-difference stencils and leverages physics residual errors as nonconformity scores, enabling data-free UQ with marginal and joint coverage guarantees across prediction domains for a range of complex PDEs. We further validate the efficacy of our method on neural PDE models for plasma modelling and shot design in fusion reactors.

Poster
CursorCore: Assist Programming through Aligning Anything

Hao Jiang, Qi Liu, Rui Li, Shengyu Ye, Shijin Wang

展开摘要

Large language models have been successfully applied to programming assistance tasks, such as code completion, code insertion, and instructional code editing. However, these applications remain insufficiently automated and struggle to effectively integrate various types of information during the programming process, including coding history, code context, and user instructions. In this work, we propose a new framework that comprehensively integrates these information sources, collect data to train our models and evaluate their performance. Firstly, to thoroughly evaluate how well models align with different types of information and the quality of their outputs, we introduce a new benchmark, APEval (Assist Programming Eval), to comprehensively assess the performance of models in programming assistance tasks. Then, for data collection, we develop a data generation pipeline, Programming-Instruct, which synthesizes training data from diverse sources, such as GitHub and online judge platforms. This pipeline can automatically generate various types of messages throughout the programming process. Finally, using this pipeline, we generate 219K samples, fine-tune multiple models, and develop the CursorCore series. We show that CursorCore outperforms other models of comparable size. This framework unifies applications such as inline chat and automated editing, contributes to the advancement of coding assistants.

Poster