NeurIPS 2026 论文列表

Conference on Neural Information Processing Systems

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6,437篇论文

按官方录用论文列表统计,可能与会议公布的数字略有出入。

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    2403.7%
  • Poster
    6,09894.7%

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WaveSem: Frequency-Adaptive Tokenization for Disentangling Semantics and Noise in Genomics

Shou Z Chen, Bing He, Zhenchao Tang, Jun Zhu, Minghao Yang, Tianxu Lv, Yu Wang, Jiayang Wu, Fang Wang, Yu Zhao, Chenchen Qin, Jianhua Yao

展开摘要

High-throughput scientific sensing, exemplified by genomics, faces a critical representation bottleneck: discrete biological events are often obscured by continuous, high-entropy stochastic noise. Standard neural codecs fail to distinguish deterministic semantics from stochastic sensor noise, inefficiently allocating their information budget to high-entropy fluctuations rather than to low-entropy structural motifs. We introduce \textsc{WaveSem}, a frequency-adaptive framework that imposes a physically motivated inductive bias on discrete representation learning. Through integrated wavelet decomposition, \textsc{WaveSem} explicitly disentangles each signal into a structured semantic core and a residual texture component. We validate this approach on large-scale nanopore sequencing data, a domain characterized by extreme sequence lengths and low signal-to-noise ratios (SNRs). \textsc{WaveSem} achieves a $14\times$ storage reduction while maintaining competitive downstream basecalling accuracy. Moreover, linear probing of the frozen encoder reaches $\mathrm{AUROC}=0.928$ for 5mC methylation detection, demonstrating that the learned tokens preserve semantic information beyond nucleotide identity. These results establish disentangled vector-quantized representations as a scalable foundation for efficient genomic analysis and long-term archival.

Poster
Total Variation Distance Estimation in Autoregressive Models

Eric Price, Kevin Tian, Zhiyang Xun, Yusong Zhu

展开摘要

Modern LLM deployments use a number of implementation choices and inference optimizations (e.g., batching, custom kernels, quantization) on top of fixed weights, so two engines serving "the same model" can produce meaningfully different distributions. We study the problem of estimating the total variation (TV) distance between two length-$n$ autoregressive distributions to additive error $\varepsilon$, under three access models: 1. Under *sample* access, we use $\widetilde{O}(\frac{n^2K}{\varepsilon^2})$ queries, where $K$ is the maximum support of the next-token distribution. 2. Under *logit* access, we use $O(\frac{n}{\varepsilon^2})$ queries, and this is tight. 3. Under *noisy logit* access, we can smoothly interpolate between the above two: if probability values are given to $\sigma$ relative error, we use $\widetilde{O}(\frac{n + n^2\sigma^2}{\varepsilon^2})$ queries. We complement our theoretical results with an empirical evaluation of our algorithms, for example measuring the distance between \texttt{sglang} and \texttt{vllm} on standard settings. Our experiments highlight the robustness and practicality of estimating the total variation distance, compared to existing alternatives such as KL divergence.

Poster
OmniEgoCap: Camera-Agnostic Sequence-Level Egocentric Motion Reconstruction

Kyungwon Cho, Jeonghyeon Na, Hanbyul Joo

展开摘要

Commercial egocentric devices capture human behavior in everyday settings, yet full-body motion reconstruction must generalize across diverse cameras and mountings. This is challenging because head trajectories under-determine body motion, while hand observations are intermittent and camera-dependent: a hand may disappear simply because it has left the camera's field of view. Existing methods treat such absences as missing data, relying on fixed visibility regimes or post-hoc optimization, and fail to generalize across devices.We present \modelname, a sequence-level diffusion framework for device-agnostic egocentric full-body motion reconstruction. Our key insight is that egocentric videos contain sequence-level evidence about both the wearer and the camera-induced visibility structure, enabling \modelname to infer consistent body shape and coherent motion from sparse head and hand cues. To prevent overfitting to a single camera setup, we further introduce geometry-aware visibility augmentation, which synthesizes visibility patterns from realistic variations in camera geometry. We also present OmniEgoDB, the first mocap benchmark with ground-truth motion captured across multiple consumer egocentric devices. Experiments on synthetic, real-device, and in-the-wild settings demonstrate superior motion reconstruction, robust cross-device generalization, and coherent in-the-wild results.

Poster
Likelihood-free inference of phylogenetic tree posterior distributions

Luc Blassel, Noémie Sauvage, Pierre Barrat-Charlaix, Bastien Boussau, Nicolas Lartillot, Laurent Jacob

展开摘要

Phylogenetic inference, the task of reconstructing how related sequences evolved from common ancestors, is a central objective in evolutionary genomics. The current state-of-the-art methods exploit probabilistic models of sequence evolution along phylogenetic trees, by searching for the tree maximizing the likelihood of observed sequences, or by estimating the posterior of the tree given the sequences in a Bayesian framework. Both approaches typically require to compute likelihoods, which is only feasible under simplifying assumptions such as independence of the evolution at the different positions of the sequence, and even then remains a costly operation. Here we present the first likelihood-free inference method for posterior distributions over phylogenies. It exploits a novel expressive encoding for pairs of sequences, and a parameterized probability distribution factorized over a succession of subtree merges. The resulting network provides well-calibrated estimates of the posterior distribution leading to more accurate tree topologies than existing methods, even under models amenable to likelihood computation. We further show that its edge against likelihood-based methods dramatically increases under models of sequence evolution with intractable likelihoods.

Poster