NeurIPS 2022 Papers

We design a predictive layer for structured-output prediction (SOP) that can be plugged into any neural network guaranteeing its predictions are consistent with a set of predefined symbolic constraints. Our Semantic Probabilistic Layer (SPL) can model intricate correlations, and hard constraints, over a structured output space all while being amenable to end-to-end learning via maximum likelihood. SPLs combine exact probabilistic inference with logical reasoning in a clean and modular way, learning complex distributions and restricting their support to solutions of the constraint. As such, they can faithfully, and efficiently, model complex SOP tasks beyond the reach of alternative neuro-symbolic approaches. We empirically demonstrate that SPLs outperform these competitors in terms of accuracy on challenging SOP tasks such as hierarchical multi-label classification, pathfinding and preference learning, while retaining perfect constraint satisfaction.

This paper investigates the problem of fairly trading off between payoff and model rewards in collaborative machine learning (ML) where parties aggregate their datasets together to obtain improved ML models over that of each party. Supposing parties can afford the optimal model trained on the aggregated dataset, we propose an allocation scheme that distributes the payoff fairly. Notably, the same scheme can be derived from two different approaches based on (a) desirable properties of the parties' payoffs or (b) that of the underlying payoff flows from one party to another. While the former is conceptually simpler, the latter can be used to handle the practical constraint on the budgets of parties. In particular, we propose desirable properties for achieving a fair adjustment of the payoff flows that can trade off between the model reward's performance and the payoff reward. We empirically demonstrate that our proposed scheme is a sensible solution in several scenarios of collaborative ML with different budget constraints.

Automatic optimization for tensor programs becomes increasingly important as we deploy deep learning in various environments, and efficient optimization relies on a rich search space and effective search. Most existing efforts adopt a search space which lacks the ability to efficiently enable domain experts to grow the search space. This paper introduces MetaSchedule, a domain-specific probabilistic programming language abstraction to construct a rich search space of tensor programs. Our abstraction allows domain experts to analyze the program, and easily propose stochastic choices in a modular way to compose program transformation accordingly. We also build an end-to-end learning-driven framework to find an optimized program for a given search space. Experimental results show that MetaSchedule can cover the search space used in the state-of-the-art tensor program optimization frameworks in a modular way. Additionally, it empowers domain experts to conveniently grow the search space and modularly enhance the system, which brings 48% speedup on end-to-end deep learning workloads.

While deep reinforcement learning has proven to be successful in solving control tasks, the ``black-box'' nature of an agent has received increasing concerns. We propose a prototype-based post-hoc \emph{policy explainer}, ProtoX, that explains a black-box agent by prototyping the agent's behaviors into scenarios, each represented by a prototypical state. When learning prototypes, ProtoX considers both visual similarity and scenario similarity. The latter is unique to the reinforcement learning context since it explains why the same action is taken in visually different states. To teach ProtoX about visual similarity, we pre-train an encoder using contrastive learning via self-supervised learning to recognize states as similar if they occur close together in time and receive the same action from the black-box agent. We then add an isometry layer to allow ProtoX to adapt scenario similarity to the downstream task. ProtoX is trained via imitation learning using behavior cloning, and thus requires no access to the environment or agent. In addition to explanation fidelity, we design different prototype shaping terms in the objective function to encourage better interpretability. We conduct various experiments to test ProtoX. Results show that ProtoX achieved high fidelity to the original black-box agent while providing meaningful and understandable explanations.

Designing learning systems which are invariant to certain data transformations is critical in machine learning. Practitioners can typically enforce a desired invariance on the trained model through the choice of a network architecture, e.g. using convolutions for translations, or using data augmentation. Yet, enforcing true invariance in the network can be difficult, and data invariances are not always known a piori. State-of-the-art methods for learning data augmentation policies require held-out data and are based on bilevel optimization problems, which are complex to solve and often computationally demanding. In this work we investigate new ways of learning invariances only from the training data. Using learnable augmentation layers built directly in the network, we demonstrate that our method is very versatile. It can incorporate any type of differentiable augmentation and be applied to a broad class of learning problems beyond computer vision. We provide empirical evidence showing that our approach is easier and faster to train than modern automatic data augmentation techniques based on bilevel optimization, while achieving comparable results. Experiments show that while the invariances transferred to a model through automatic data augmentation are limited by the model expressivity, the invariance yielded by our approach is insensitive to it by design.

Diffusion-based Deep Generative Models (DDGMs) offer state-of-the-art performance in generative modeling. Their main strength comes from their unique setup in which a model (the backward diffusion process) is trained to reverse the forward diffusion process, which gradually adds noise to the input signal. Although DDGMs are well studied, it is still unclear how the small amount of noise is transformed during the backward diffusion process. Here, we focus on analyzing this problem to gain more insight into the behavior of DDGMs and their denoising and generative capabilities. We observe a fluid transition point that changes the functionality of the backward diffusion process from generating a (corrupted) image from noise to denoising the corrupted image to the final sample. Based on this observation, we postulate to divide a DDGM into two parts: a denoiser and a generator. The denoiser could be parameterized by a denoising auto-encoder, while the generator is a diffusion-based model with its own set of parameters. We experimentally validate our proposition, showing its pros and cons.

Offline reinforcement learning (RL) aims to find performant policies from logged data without further environment interaction. Model-based algorithms, which learn a model of the environment from the dataset and perform conservative policy optimisation within that model, have emerged as a promising approach to this problem. In this work, we present Robust Adversarial Model-Based Offline RL (RAMBO), a novel approach to model-based offline RL. We formulate the problem as a two-player zero sum game against an adversarial environment model. The model is trained to minimise the value function while still accurately predicting the transitions in the dataset, forcing the policy to act conservatively in areas not covered by the dataset. To approximately solve the two-player game, we alternate between optimising the policy and adversarially optimising the model. The problem formulation that we address is theoretically grounded, resulting in a probably approximately correct (PAC) performance guarantee and a pessimistic value function which lower bounds the value function in the true environment. We evaluate our approach on widely studied offline RL benchmarks, and demonstrate that it outperforms existing state-of-the-art baselines.

Machine Learning models are often susceptible to poor performance on instances sampled from bad environments. For example, an image classifier could provide low accuracy on images captured under low lighting conditions. In high stake ML applications, such as AI-driven medical diagnostics, a better option could be to provide recourse in the form of alternative environment settings in which to recapture the instance for more reliable diagnostics. In this paper, we propose a model called {\em RecourseNet} that learns to apply recourse on the space of environments so that the recoursed instances are amenable to better predictions by the classifier. Learning to output optimal recourse is challenging because we do not assume access to the underlying physical process that generates the recoursed instances. Also, the optimal setting could be instance-dependent --- for example the best camera angle for object recognition could be a function of the object's shape. We propose a novel three-level training method that (a) Learns a classifier that is optimized for high performance under recourse, (b) Learns a recourse predictor when the training data may contain only limited instances under good environment settings, and (c) Triggers recourse selectively only when recourse is likely to improve classifier confidence.

Graph neural networks (GNN) are an effective framework that exploit inter-relationships within graph-structured data for learning. Principal component analysis (PCA) involves the projection of data on the eigenspace of the covariance matrix and draws similarities with the graph convolutional filters in GNNs. Motivated by this observation, we study a GNN architecture, called coVariance neural network (VNN), that operates on sample covariance matrices as graphs. We theoretically establish the stability of VNNs to perturbations in the covariance matrix, thus, implying an advantage over standard PCA-based data analysis approaches that are prone to instability due to principal components associated with close eigenvalues. Our experiments on real-world datasets validate our theoretical results and show that VNN performance is indeed more stable than PCA-based statistical approaches. Moreover, our experiments on multi-resolution datasets also demonstrate that VNNs are amenable to transferability of performance over covariance matrices of different dimensions; a feature that is infeasible for PCA-based approaches.

Understanding decision-making is a core goal in both neuroscience and psychology, and computational models have often been helpful in the pursuit of this goal. While many models have been developed for characterizing behavior in binary decision-making and bandit tasks, comparatively little work has focused on animal decision-making in more complex tasks, such as navigation through a maze. Inverse reinforcement learning (IRL) is a promising approach for understanding such behavior, as it aims to infer the unknown reward function of an agent from its observed trajectories through state space. However, IRL has yet to be widely applied in neuroscience. One potential reason for this is that existing IRL frameworks assume that an agent's reward function is fixed over time. To address this shortcoming, we introduce dynamic inverse reinforcement learning (DIRL), a novel IRL framework that allows for time-varying intrinsic rewards. Our method parametrizes the unknown reward function as a time-varying linear combination of spatial reward maps (which we refer to as "goal maps"). We develop an efficient inference method for recovering this dynamic reward function from behavioral data. We demonstrate DIRL in simulated experiments and then apply it to a dataset of mice exploring a labyrinth. Our method returns interpretable reward functions for two separate cohorts of mice, and provides a novel characterization of exploratory behavior. We expect DIRL to have broad applicability in neuroscience, and to facilitate the design of biologically-inspired reward functions for training artificial agents.

Due to the rapid growth in the scale of circuits and the desire for knowledge transfer from old designs to new ones, deep learning technologies have been widely exploited in Electronic Design Automation (EDA) to assist circuit design. In chip design cycles, we might encounter heterogeneous and diverse information sources, including the two most informative ones: the netlist and the design layout. However, handling each information source independently is sub-optimal. In this paper, we propose a novel way to integrate the multiple information sources under a unified heterogeneous graph named Circuit Graph, where topological and geometrical information is well integrated. Then, we propose Circuit GNN to fully utilize the features of vertices, edges as well as heterogeneous information during the message passing process. It is the first attempt to design a versatile circuit representation that is compatible across multiple EDA tasks and stages. Experiments on the two most representative prediction tasks in EDA show that our solution reaches state-of-the-art performance in both logic synthesis and global placement chip design stages. Besides, it achieves a 10x speed-up on congestion prediction compared to the state-of-the-art model.

Bayesian optimization over the latent spaces of deep autoencoder models (DAEs) has recently emerged as a promising new approach for optimizing challenging black-box functions over structured, discrete, hard-to-enumerate search spaces (e.g., molecules). Here the DAE dramatically simplifies the search space by mapping inputs into a continuous latent space where familiar Bayesian optimization tools can be more readily applied. Despite this simplification, the latent space typically remains high-dimensional. Thus, even with a well-suited latent space, these approaches do not necessarily provide a complete solution, but may rather shift the structured optimization problem to a high-dimensional one. In this paper, we propose LOL-BO, which adapts the notion of trust regions explored in recent work on high-dimensional Bayesian optimization to the structured setting. By reformulating the encoder to function as both an encoder for the DAE globally and as a deep kernel for the surrogate model within a trust region, we better align the notion of local optimization in the latent space with local optimization in the input space. LOL-BO achieves as much as 20 times improvement over state-of-the-art latent space Bayesian optimization methods across six real-world benchmarks, demonstrating that improvement in optimization strategies is as important as developing better DAE models.

Learning an optimal Individualized Treatment Rule (ITR) is a very important problem in precision medicine. This paper is concerned with the challenge when the number of treatment arms is large, and some groups of treatments in the large treatment space may work similarly for the patients. Motivated by the recent development of supervised clustering, we propose a novel adaptive fusion based method to cluster the treatments with similar treatment effects together and estimate the optimal ITR simultaneously through a single convex optimization. The problem is formulated as balancing \textit{loss}$+$\textit{penalty} terms with a tuning parameter, which allows the entire solution path of the treatment clustering process to be clearly visualized hierarchically. For computation, we propose an efficient algorithm based on accelerated proximal gradient and further conduct a novel group-lasso based algorithm for variable selection to boost the performance. Moreover, we demonstrate the theoretical guarantee of recovering the underlying true clustering structure of the treatments for our method. Finally, we demonstrate the superior performance of our method via both simulations and a real data application on cancer treatment, which may assist the decision making process for doctors.

Finding accurate solutions to the Schrödinger equation is the key unsolved challenge of computational chemistry. Given its importance for the development of new chemical compounds, decades of research have been dedicated to this problem, but due to the large dimensionality even the best available methods do not yet reach the desired accuracy. Recently the combination of deep learning with Monte Carlo methods has emerged as a promising way to obtain highly accurate energies and moderate scaling of computational cost. In this paper we significantly contribute towards this goal by introducing a novel deep-learning architecture that achieves 40-70% lower energy error at 6x lower computational cost compared to previous approaches. Using our method we establish a new benchmark by calculating the most accurate variational ground state energies ever published for a number of different atoms and molecules. We systematically break down and measure our improvements, focusing in particular on the effect of increasing physical prior knowledge. We surprisingly find that increasing the prior knowledge given to the architecture can actually decrease accuracy.

This paper investigates simultaneous preference and metric learning from a crowd of respondents. A set of items represented by $d$-dimensional feature vectors and paired comparisons of the form ``item $i$ is preferable to item $j$'' made by each user is given. Our model jointly learns a distance metric that characterizes the crowd's general measure of item similarities along with a latent ideal point for each user reflecting their individual preferences. This model has the flexibility to capture individual preferences, while enjoying a metric learning sample cost that is amortized over the crowd. We first study this problem in a noiseless, continuous response setting (i.e., responses equal to differences of item distances) to understand the fundamental limits of learning. Next, we establish prediction error guarantees for noisy, binary measurements such as may be collected from human respondents, and show how the sample complexity improves when the underlying metric is low-rank. Finally, we establish recovery guarantees under assumptions on the response distribution. We demonstrate the performance of our model on both simulated data and on a dataset of color preference judgements across a large number of users.

We introduce HandMeThat, a benchmark for a holistic evaluation of instruction understanding and following in physical and social environments. While previous datasets primarily focused on language grounding and planning, HandMeThat considers the resolution of human instructions with ambiguities based on the physical (object states and relations) and social (human actions and goals) information. HandMeThat contains 10,000 episodes of human-robot interactions. In each episode, the robot first observes a trajectory of human actions towards her internal goal. Next, the robot receives a human instruction and should take actions to accomplish the subgoal set through the instruction. In this paper, we present a textual interface for our benchmark, where the robot interacts with a virtual environment through textual commands. We evaluate several baseline models on HandMeThat, and show that both offline and online reinforcement learning algorithms perform poorly on HandMeThat, suggesting significant room for future work on physical and social human-robot communications and interactions.

Topological data analysis (TDA) delivers invaluable and complementary information on the intrinsic properties of data inaccessible to conventional methods. However, high computational costs remain the primary roadblock hindering the successful application of TDA in real-world studies, particularly with machine learning on large complex networks. Indeed, most modern networks such as citation, blockchain, and online social networks often have hundreds of thousands of vertices, making the application of existing TDA methods infeasible. We develop two new, remarkably simple but effective algorithms to compute the exact persistence diagrams of large graphs to address this major TDA limitation. First, we prove that $(k+1)$-core of a graph $G$ suffices to compute its $k^{th}$ persistence diagram, $PD_k(G)$. Second, we introduce a pruning algorithm for graphs to compute their persistence diagrams by removing the dominated vertices. Our experiments on large networks show that our novel approach can achieve computational gains up to 95%. The developed framework provides the first bridge between the graph theory and TDA, with applications in machine learning of large complex networks. Our implementation is available at https://github.com/cakcora/PersistentHomologyWithCoralPrunit.

Consider the problem of improving the estimation of conditional average treatment effects (CATE) for a target domain of interest by leveraging related information from a source domain with a different feature space. This heterogeneous transfer learning problem for CATE estimation is ubiquitous in areas such as healthcare where we may wish to evaluate the effectiveness of a treatment for a new patient population for which different clinical covariates and limited data are available. In this paper, we address this problem by introducing several building blocks that use representation learning to handle the heterogeneous feature spaces and a flexible multi-task architecture with shared and private layers to transfer information between potential outcome functions across domains. Then, we show how these building blocks can be used to recover transfer learning equivalents of the standard CATE learners. On a new semi-synthetic data simulation benchmark for heterogeneous transfer learning, we not only demonstrate performance improvements of our heterogeneous transfer causal effect learners across datasets, but also provide insights into the differences between these learners from a transfer perspective.

In knowledge distillation, previous feature distillation methods mainly focus on the design of loss functions and the selection of the distilled layers, while the effect of the feature projector between the student and the teacher remains under-explored. In this paper, we first discuss a plausible mechanism of the projector with empirical evidence and then propose a new feature distillation method based on a projector ensemble for further performance improvement. We observe that the student network benefits from a projector even if the feature dimensions of the student and the teacher are the same. Training a student backbone without a projector can be considered as a multi-task learning process, namely achieving discriminative feature extraction for classification and feature matching between the student and the teacher for distillation at the same time. We hypothesize and empirically verify that without a projector, the student network tends to overfit the teacher's feature distributions despite having different architecture and weights initialization. This leads to degradation on the quality of the student's deep features that are eventually used in classification. Adding a projector, on the other hand, disentangles the two learning tasks and helps the student network to focus better on the main feature extraction task while still being able to utilize teacher features as a guidance through the projector. Motivated by the positive effect of the projector in feature distillation, we propose an ensemble of projectors to further improve the quality of student features. Experimental results on different datasets with a series of teacher-student pairs illustrate the effectiveness of the proposed method. Code is available at https://github.com/chenyd7/PEFD.