ICLR 2025 Papers

International Conference on Learning Representations

Decision breakdown

3,703papers

Counted from the official paper list; may differ slightly from the number the conference announced.

  • Oral
    2135.8%
  • Spotlight
    38010.3%
  • Poster
    3,11084.0%

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Explanations of GNN on Evolving Graphs via Axiomatic Layer edges

Yazheng Liu, Sihong Xie

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Graphs are ubiquitous in social networks, chemical molecules, and financial data, where Graph Neural Networks (GNNs) achieve superior predictive accuracy. Graphs can be evolving, while understanding how GNN predictions respond to the evolution provides significant insight and trust. We explore the problem of explaining evolving GNN predictions due to continuously changing edge weights. We introduce a layer edge-based explanation to balance explanation fidelity and interpretability. We propose a novel framework to address the challenges of axiomatic attribution and the entanglement of multiple computational graph paths due to continuous change of edge weights. We first design an axiomatic attribution of the evolution of the model prediction to message flows, then develop Shapley value to fairly map message flow contributions to layer edges. We formulate a novel optimization problem to find the critical layer edges based on KL-divergence minimization. Extensive experiments on eight datasets for node classification, link prediction, and graph classification tasks with evolving graphs demonstrate the better fidelity and interpretability of the proposed method over the baseline methods. The code is available at https://github.com/yazhengliu/Axiomatic-Layer-Edges/tree/main.

Poster
Streamlining Prediction in Bayesian Deep Learning

Rui Li, Marcus Klasson, Arno Solin, Martin Trapp

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The rising interest in Bayesian deep learning (BDL) has led to a plethora of methods for estimating the posterior distribution. However, efficient computation of inferences, such as predictions, has been largely overlooked with Monte Carlo integration remaining the standard. In this work we examine streamlining prediction in BDL through a single forward pass without sampling. For this, we use local linearisation of activation functions and local Gaussian approximations at linear layers. Thus allowing us to analytically compute an approximation of the posterior predictive distribution. We showcase our approach for both MLP and transformers, such as ViT and GPT-2, and assess its performance on regression and classification tasks. Open-source library: https://github.com/AaltoML/SUQ.

Poster
Think Thrice Before You Act: Progressive Thought Refinement in Large Language Models

Chengyu Du, Jinyi Han, Yizhou Ying, Aili Chen, Qianyu He, Haokun Zhao, Haoran Guo, Sirui Xia, Jiaqing Liang, Zulong Chen, Liangyue Li, Yanghua Xiao

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Recent advancements in large language models (LLMs) have demonstrated that progressive refinement, rather than providing a single answer, results in more accurate and thoughtful outputs. However, existing methods often rely heavily on supervision signals to evaluate previous responses, making it difficult to effectively assess output quality in more open-ended scenarios. Additionally, these methods are typically designed for specific tasks, which limits their generalization to new domains. To address these limitations, we propose Progressive Thought Refinement (PTR), a framework that enables LLMs to progressively refine their responses. PTR operates in two phases: (1) Thought data construction stage: We propose a weak and strong model collaborative selection strategy to build a high-quality progressive refinement dataset to ensure logical consistency from thought to answers, and the answers are gradually refined in each round. (2) Thought-Mask Fine-Tuning Phase: We design a training structure to mask the "thought" and adjust loss weights to encourage LLMs to refine prior thought, teaching them to implicitly understand "how to improve" rather than "what is correct." Experimental results show that PTR significantly enhances LLM performance across ten diverse tasks (avg. from 49.6% to 53.5%) without task-specific fine-tuning. Notably, in more open-ended tasks, LLMs also demonstrate substantial improvements in the quality of responses beyond mere accuracy, suggesting that PTR truly teaches LLMs to self-improve over time. Our work is now open-source. https://github.com/cydu24/Progressive-Thought-Refinement

Poster
TEASER: Token Enhanced Spatial Modeling for Expressions Reconstruction

Yunfei Liu, Lei Zhu, Lijian Lin, Ye Zhu, Ailing Zhang, Yu Li

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3D facial reconstruction from a single in-the-wild image is a crucial task in human-centered computer vision tasks. While existing methods can recover accurate facial shapes, there remains significant space for improvement in fine-grained expression capture. Current approaches struggle with irregular mouth shapes, exaggerated expressions, and asymmetrical facial movements. We present TEASER (Token EnhAnced Spatial modeling for Expressions Reconstruction), which addresses these challenges and enhances 3D facial geometry performance⁠⁠. TEASER tackles two main limitations of existing methods: insufficient photometric loss for self-reconstruction and inaccurate localization of subtle expressions. We introduce a multi-scale tokenizer to extract facial appearance information. Combined with a neural renderer, these tokens provide precise geometric guidance for expression reconstruction. Furthermore, TEASER incorporates a pose-dependent landmark loss to further improve geometric performance⁠. Our approach not only significantly enhances expression reconstruction quality but also offers interpretable tokens suitable for various downstream applications, such as photorealistic facial video driving, expression transfer, and identity swapping. Quantitative and qualitative experimental results across multiple datasets demonstrate that TEASER achieves state-of-the-art performance in precise expression reconstruction.

Poster
Leveraging Flatness to Improve Information-Theoretic Generalization Bounds for SGD

Ze Peng, Jian Zhang, Yisen Wang, Lei Qi, Yinghuan Shi, Yang Gao

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Information-theoretic (IT) generalization bounds have been used to study the generalization of learning algorithms. These bounds are intrinsically data- and algorithm-dependent so that one can exploit the properties of data and algorithm to derive tighter bounds. However, we observe that although the flatness bias is crucial for SGD’s generalization, these bounds fail to capture the improved generalization under better flatness and are also numerically loose. This is caused by the inadequate leverage of SGD's flatness bias in existing IT bounds. This paper derives a more flatness-leveraging IT bound for the flatness-favoring SGD. The bound indicates the learned models generalize better if the large-variance directions of the final weight covariance have small local curvatures in the loss landscape. Experiments on deep neural networks show our bound not only correctly reflects the better generalization when flatness is improved, but is also numerically much tighter. This is achieved by a flexible technique called "omniscient trajectory". When applied to Gradient Descent’s minimax excess risk on convex-Lipschitz-Bounded problems, it improves representative IT bounds’ $\Omega(1)$ rates to $O(1/\sqrt{n})$. It also implies a by-pass of memorization-generalization trade-offs. Codes are available at [https://github.com/peng-ze/omniscient-bounds](https://github.com/peng-ze/omniscient-bounds).

Poster
Boltzmann priors for Implicit Transfer Operators

Juan Viguera Diez, Mathias Jacob Schreiner, Ola Engkvist, Simon Olsson

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Accurate prediction of thermodynamic properties is essential in drug discovery and materials science. Molecular dynamics (MD) simulations provide a principled approach to this task, yet they typically rely on prohibitively long sequential simulations. Implicit Transfer Operator (ITO) Learning offers a promising approach to address this limitation by enabling stable simulation with time steps orders of magnitude larger than MD. However, to train ITOs, we need extensive, unbiased MD data, limiting the scope of this framework. Here, we introduce Boltzmann Priors for ITO (BoPITO) to enhance ITO learning in two ways. First, BoPITO enables more efficient data generation, and second, it embeds inductive biases for long-term dynamical behavior, simultaneously improving sample efficiency by one order of magnitude and guaranteeing asymptotically unbiased equilibrium statistics. Furthermore, we showcase the use of BoPITO in a new tunable sampling protocol interpolating between ITOs trained on off-equilibrium simulations and an equilibrium model by incorporating unbiased correlation functions. Code is available at https://github.com/olsson-group/bopito.

Poster
Diverse Preference Learning for Capabilities and Alignment

Stewart Slocum, Asher Parker-Sartori, Dylan Hadfield-Menell

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As LLMs increasingly impact society, their ability to represent diverse perspectives is critical. However, recent studies reveal that alignment algorithms such as RLHF and DPO significantly reduce the diversity of LLM outputs. Not only do aligned LLMs generate text with repetitive structure and word choice, they also approach problems in more uniform ways, and their responses reflect a narrower range of societal perspectives. We attribute this problem to the KL divergence regularizer employed in preference learning algorithms. This causes the model to overweight majority opinions and sacrifice diversity in exchange for optimal reward. To address this, we propose Soft Preference Learning, which decouples the entropy and cross-entropy terms in the KL penalty — allowing for fine-grained control over LLM generation diversity. From a capabilities perspective, LLMs trained using Soft Preference Learning attain higher accuracy on difficult repeated sampling tasks and produce outputs with greater semantic and lexical diversity. From an alignment perspective, they are capable of representing a wider range of societal viewpoints and display improved logit calibration. Notably, Soft Preference Learning resembles, but is a Pareto improvement over, standard temperature scaling.

Poster
CONTRA: Conformal Prediction Region via Normalizing Flow Transformation

Zhenhan Fang, Aixin Tan, Jian Huang

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Density estimation and reliable prediction regions for outputs are crucial in supervised and unsupervised learning. While conformal prediction effectively generates coverage-guaranteed regions, it struggles with multi-dimensional outputs due to reliance on one-dimensional nonconformity scores. To address this, we introduce CONTRA: CONformal prediction region via normalizing flow TRAnsformation. CONTRA utilizes the latent spaces of normalizing flows to define nonconformity scores based on distances from the center. This allows for the mapping of high-density regions in latent space to sharp prediction regions in the output space, surpassing traditional hyperrectangular or elliptical conformal regions. Further, for scenarios where other predictive models are favored over flow-based models, we extend CONTRA to enhance any such model with a reliable prediction region by training a simple normalizing flow on the residuals. We demonstrate that both CONTRA and its extension maintain guaranteed coverage probability and outperform existing methods in generating accurate prediction regions across various datasets. We conclude that CONTRA is an effective tool for (conditional) density estimation, addressing the under-explored challenge of delivering multi-dimensional prediction regions.

Poster
Bayesian WeakS-to-Strong from Text Classification to Generation

Ziyun Cui, ziyang zhang, Guangzhi Sun, Wen Wu, Chao Zhang

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Advances in large language models raise the question of how alignment techniques will adapt as models become increasingly complex and humans will only be able to supervise them weakly. Weak-to-Strong mimics such a scenario where weak model supervision attempts to harness the full capabilities of a much stronger model. This work extends Weak-to-Strong to WeakS-to-Strong by exploring an ensemble of weak models which simulate the variability in human opinions. Confidence scores are estimated using a Bayesian approach to guide the WeakS-to-Strong generalization. Furthermore, we extend the application of WeakS-to-Strong from text classification tasks to text generation tasks where more advanced strategies are investigated for supervision. Moreover, direct preference optimization is applied to advance the student model's preference learning, beyond the basic learning framework of teacher forcing. Results demonstrate the effectiveness of the proposed approach for the reliability of a strong student model, showing potential for superalignment.

Poster
Multimodal Lego: Model Merging and Fine-Tuning Across Topologies and Modalities in Biomedicine

Konstantin Hemker, Nikola Simidjievski, Mateja Jamnik

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Learning holistic computational representations in physical, chemical or biological systems requires the ability to process information from different distributions and modalities within the same model. Thus, the demand for multimodal machine learning models has sharply risen for modalities that go beyond vision and language, such as sequences, graphs, time series, or tabular data. While there are many available multimodal fusion and alignment approaches, most of them require end-to-end training, scale quadratically with the number of modalities, cannot handle cases of high modality imbalance in the training set, or are highly topology-specific, making them too restrictive for many biomedical learning tasks. This paper presents Multimodal Lego (MM-Lego), a general-purpose fusion framework to turn any set of encoders into a competitive multimodal model with no or minimal fine-tuning. We achieve this by introducing a wrapper for any unimodal encoder that enforces shape consistency between modality representations. It harmonises these representations by learning features in the frequency domain to enable model merging with little signal interference. We show that MM-Lego 1) can be used as a model merging method which achieves competitive performance with end-to-end fusion models without any fine-tuning, 2) can operate on any unimodal encoder, and 3) is a model fusion method that, with minimal fine-tuning, surpasses all benchmarks in five out of seven datasets.

Poster
Distribution-Free Data Uncertainty for Neural Network Regression

Domokos M. Kelen, Ádám Jung, Péter Kersch, Andras A Benczur

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Quantifying uncertainty is an essential part of predictive modeling, especially in the context of high-stakes decision-making. While classification output includes data uncertainty by design in the form of class probabilities, the regression task generally aims only to predict the expected value of the target variable. Probabilistic extensions often assume parametric distributions around the expected value, optimizing the likelihood over the resulting explicit densities. However, using parametric distributions can limit practical applicability, making it difficult for models to capture skewed, multi-modal, or otherwise complex distributions. In this paper, we propose optimizing a novel nondeterministic neural network regression architecture for loss functions derived from a sample-based approximation of the continuous ranked probability score (CRPS), enabling a truly distribution-free approach by learning to sample from the target's aleatoric distribution, rather than predicting explicit densities. Our approach allows the model to learn well-calibrated, arbitrary uni- and multivariate output distributions. We evaluate the method on a variety of synthetic and real-world tasks, including uni- and multivariate problems, function inverse approximation, and standard regression uncertainty benchmarks. Finally, we make all experiment code publicly available.

Poster
Jump Your Steps: Optimizing Sampling Schedule of Discrete Diffusion Models

Yong-Hyun Park, Chieh-Hsin Lai, Satoshi Hayakawa, Yuhta Takida, Yuki Mitsufuji

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Diffusion models have seen notable success in continuous domains, leading to the development of discrete diffusion models (DDMs) for discrete variables. Despite recent advances, DDMs face the challenge of slow sampling speeds. While parallel sampling methods like $\tau$-leaping accelerate this process, they introduce _Compounding Decoding Error_ (CDE), where discrepancies arise between the true distribution and the approximation from parallel token generation, leading to degraded sample quality. In this work, we present _Jump Your Steps_ (JYS), a novel approach that optimizes the allocation of discrete sampling timesteps by minimizing CDE without extra computational cost. More precisely, we derive a practical upper bound on CDE and propose an efficient algorithm for searching for the optimal sampling schedule. Extensive experiments across image, music, and text generation show that JYS significantly improves sampling quality, establishing it as a versatile framework for enhancing DDM performance for fast sampling.

Poster
A Generalist Hanabi Agent

Arjun V Sudhakar, Hadi Nekoei, Mathieu Reymond, Miao Liu, Janarthanan Rajendran, Sarath Chandar

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Traditional multi-agent reinforcement learning (MARL) systems can develop cooperative strategies through repeated interactions. However, these systems are unable to perform well on any other setting than the one they have been trained on, and struggle to successfully cooperate with unfamiliar collaborators. This is particularly visible in the Hanabi benchmark, a popular 2-to-5 player cooperative card-game which requires complex reasoning and precise assistance to other agents. Current MARL agents for Hanabi can only learn one specific game-setting (e.g., 2-player games), and play with the same algorithmic agents. This is in stark contrast to humans, who can quickly adjust their strategies to work with unfamiliar partners or situations. In this paper, we introduce Recurrent Replay Relevance Distributed DQN (R3D2), a generalist agent for Hanabi, designed to overcome these limitations. We reformulate the task using text, as language has been shown to improve transfer. We then propose a distributed MARL algorithm that copes with the resulting dynamic observation- and action-space. In doing so, our agent is the first that can play all game settings concurrently, and extend strategies learned from one setting to other ones. As a consequence, our agent also demonstrates the ability to collaborate with different algorithmic agents ---agents that are themselves unable to do so.

Poster
Rethinking Fair Representation Learning for Performance-Sensitive Tasks

Charles Jones, Fabio De Sousa Ribeiro, Mélanie Roschewitz, Daniel C. Castro, Ben Glocker

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We investigate the prominent class of fair representation learning methods for bias mitigation. Using causal reasoning to define and formalise different sources of dataset bias, we reveal important implicit assumptions inherent to these methods. We prove fundamental limitations on fair representation learning when evaluation data is drawn from the same distribution as training data and run experiments across a range of medical modalities to examine the performance of fair representation learning under distribution shifts. Our results explain apparent contradictions in the existing literature and reveal how rarely considered causal and statistical aspects of the underlying data affect the validity of fair representation learning. We raise doubts about current evaluation practices and the applicability of fair representation learning methods in performance-sensitive settings. We argue that fine-grained analysis of dataset biases should play a key role in the field moving forward.

Poster
Generative Flows on Synthetic Pathway for Drug Design

Seonghwan Seo, Minsu Kim, Tony Shen, Martin Ester, Jinkyoo Park, Sungsoo Ahn, Woo Youn Kim

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Generative models in drug discovery have recently gained attention as efficient alternatives to brute-force virtual screening. However, most existing models do not account for synthesizability, limiting their practical use in real-world scenarios. In this paper, we propose RxnFlow, which sequentially assembles molecules using predefined molecular building blocks and chemical reaction templates to constrain the synthetic chemical pathway. We then train on this sequential generating process with the objective of generative flow networks (GFlowNets) to generate both highly rewarded and diverse molecules. To mitigate the large action space of synthetic pathways in GFlowNets, we implement a novel action space subsampling method. This enables RxnFlow to learn generative flows over extensive action spaces comprising combinations of 1.2 million building blocks and 71 reaction templates without significant computational overhead. Additionally, RxnFlow can employ modified or expanded action spaces for generation without retraining, allowing for the introduction of additional objectives or the incorporation of newly discovered building blocks. We experimentally demonstrate that RxnFlow outperforms existing reaction-based and fragment-based models in pocket-specific optimization across various target pockets. Furthermore, RxnFlow achieves state-of-the-art performance on CrossDocked2020 for pocket-conditional generation, with an average Vina score of –8.85 kcal/mol and 34.8% synthesizability. Code is available at https://github.com/SeonghwanSeo/RxnFlow.

Poster
Revisit Micro-batch Clipping: Adaptive Data Pruning via Gradient Manipulation

Lun Wang

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Micro-batch clipping, a gradient clipping method, has recently shown potential in enhancing auto-speech recognition (ASR) model performance. However, the underlying mechanism behind this improvement remains mysterious, particularly the observation that only certain micro-batch sizes are beneficial. In this paper, we make the first attempt to explain this phenomenon. Inspired by recent data pruning research, we assume that specific training samples may impede model convergence during certain training phases. Under this assumption, the convergence analysis shows that micro-batch clipping can improve the convergence rate asymptotically at the cost of an additional constant bias that does not diminish with more training iterations. The bias is dependent on a few factors and can be minimized at specific micro-batch size, thereby elucidating the existence of the sweet-spot micro-batch size observed previously. We also verify the effectiveness of micro-batch clipping beyond speech models on vision and language models, and show promising performance gains in these domains. An exploration of potential limitations shows that micro-batch clipping is less effective when training data originates from multiple distinct domains.

Poster
FakeShield: Explainable Image Forgery Detection and Localization via Multi-modal Large Language Models

Zhipei Xu, Xuanyu Zhang, Runyi Li, Zecheng Tang, Qing Huang, Jian Zhang

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The rapid development of generative AI is a double-edged sword, which not only facilitates content creation but also makes image manipulation easier and more difficult to detect. Although current image forgery detection and localization (IFDL) methods are generally effective, they tend to face two challenges: \textbf{1)} black-box nature with unknown detection principle, \textbf{2)} limited generalization across diverse tampering methods (e.g., Photoshop, DeepFake, AIGC-Editing). To address these issues, we propose the explainable IFDL task and design FakeShield, a multi-modal framework capable of evaluating image authenticity, generating tampered region masks, and providing a judgment basis based on pixel-level and image-level tampering clues. Additionally, we leverage GPT-4o to enhance existing IFDL datasets, creating the Multi-Modal Tamper Description dataSet (MMTD-Set) for training FakeShield's tampering analysis capabilities. Meanwhile, we incorporate a Domain Tag-guided Explainable Forgery Detection Module (DTE-FDM) and a Multi-modal Forgery Localization Module (MFLM) to address various types of tamper detection interpretation and achieve forgery localization guided by detailed textual descriptions. Extensive experiments demonstrate that FakeShield effectively detects and localizes various tampering techniques, offering an explainable and superior solution compared to previous IFDL methods. The code is available at https://github.com/zhipeixu/FakeShield.

Poster
XLand-100B: A Large-Scale Multi-Task Dataset for In-Context Reinforcement Learning

Alexander Nikulin, Ilya Zisman, Alexey Zemtsov, Vladislav Kurenkov

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Following the success of the in-context learning paradigm in large-scale language and computer vision models, the recently emerging field of in-context reinforcement learning is experiencing a rapid growth. However, its development has been held back by the lack of challenging benchmarks, as all the experiments have been carried out in simple environments and on small-scale datasets. We present **XLand-100B**, a large-scale dataset for in-context reinforcement learning based on the XLand-MiniGrid environment, as a first step to alleviate this problem. It contains complete learning histories for nearly $30,000$ different tasks, covering $100$B transitions and $2.5$B episodes. It took $50,000$ GPU hours to collect the dataset, which is beyond the reach of most academic labs. Along with the dataset, we provide the utilities to reproduce or expand it even further. We also benchmark common in-context RL baselines and show that they struggle to generalize to novel and diverse tasks. With this substantial effort, we aim to democratize research in the rapidly growing field of in-context reinforcement learning and provide a solid foundation for further scaling.

Poster
Varying Shades of Wrong: Aligning LLMs with Wrong Answers Only

Jihan Yao, Wenxuan Ding, Shangbin Feng, Lucy Lu Wang, Yulia Tsvetkov

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In the absence of abundant reliable annotations for challenging tasks and contexts, how can we expand the frontier of LLM capabilities with potentially wrong answers? We focus on two research questions: (1) Can LLMs generate reliable preferences among wrong options? And if so, (2) Would alignment with such wrong-over-wrong preferences be helpful? We employ methods based on self-consistency, token probabilities, and LLM-as-a-judge to elicit wrong-over-wrong preferences, and fine-tune language models with preference optimization approaches using these synthesized preferences. Extensive experiments with seven LLMs and eight datasets demonstrate that (1) LLMs do have preliminary capability in distinguishing various shades of wrong, achieving up to 20.9% higher performance than random guess; (2) Alignment with wrong-over-wrong preferences helps LLMs to produce less wrong and sometimes even outright correct answers, while improving overall model calibration. Code and data are publicly available at https://github.com/yaojh18/Varying-Shades-of-Wrong.

Poster
Task-Adaptive Pretrained Language Models via Clustered-Importance Sampling

David Grangier, Simin Fan, Skyler Seto, Pierre Ablin

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Specialist language models (LMs) focus on a specific task or domain on which they often outperform generalist LMs of the same size. However, the specialist data needed to pretrain these models is only available in limited amount for most tasks. In this work, we build specialist models from large generalist training sets instead. We adjust the training distribution of the generalist data with guidance from the limited domain-specific data. We explore several approaches, with clustered importance sampling standing out. This method clusters the generalist dataset and samples from these clusters based on their frequencies in the smaller specialist dataset. It is scalable, suitable for pretraining and continued pretraining, it works well in multi-task settings. Our findings demonstrate improvements across different domains in terms of language modeling perplexity and accuracy on multiple-choice question tasks. We also present ablation studies that examine the impact of dataset sizes, clustering configurations, and model sizes.

Poster