Molecular Modeling papers, 2023–2026

Key findings

• Molecular Modeling went from 137 papers in 2023 to 373 in 2026, roughly 2.7x in three years.
• NeurIPS publishes the most Molecular Modeling work: 351 papers from 2023 to 2026, 34% of the four-venue total.
• The fastest-growing overlap is with Applications · chemistry physics and earth sciences: papers tagged with both rose from 5 in 2023 to 59 in 2026.
• Among the 5 topics under Graph and Structured Data, it ranks #3 by 2026 paper count; the fastest grower in the group, Time Series, is up 3.2x versus 2.7x here.

Representative papers

Spread across years and venues so every edition shows up

• NeurIPS 2026Atomic Trajectory Modeling with State Space Models for Biomolecular Dynamics
• ICML 2026Controlled SDEs for Long-Horizon Motion Generation under Latent Decision Uncertainty
• ICLR 2026A Scalable Inter-edge Correlation Modeling in CopulaGNN for Link Sign Prediction
• CVPR 2026CARE A Molecular-Guided Foundation Model with Adaptive Region Modeling for
• NeurIPS 20253D-GSRD: 3D Molecular Graph Auto-Encoder with Selective Re-mask Decoding
• ICML 2025BAnG: Bidirectional Anchored Generation for Conditional RNA Design
• ICLR 20253D-MolT5: Leveraging Discrete Structural Information for Molecule-Text Modeling
• CVPR 2025Bridging Gait Recognition and Large Language Models Sequence Modeling
• NeurIPS 20244DBInfer: A 4D Benchmarking Toolbox for Graph-Centric Predictive Modeling on RDBs
• ICML 2024An amortized approach to non-linear mixed-effects modeling based on neural posterior estimation
• ICLR 2024$\texttt{NAISR}$: A 3D Neural Additive Model for Interpretable Shape Representation
• CVPR 2024EVS-assisted Joint Deblurring Rolling-Shutter Correction and Video Frame Interpolation through Sensor Inverse Modeling
• NeurIPS 2023Learning Invariant Molecular Representation in Latent Discrete Space
• ICML 2023Biases in Evaluation of Molecular Optimization Methods and Bias Reduction Strategies
• ICLR 2023$\mathcal{O}$-GNN: incorporating ring priors into molecular modeling
• CVPR 2023BAAM: Monocular 3D Pose and Shape Reconstruction With Bi-Contextual Attention Module and Attention-Guided Modeling
• NeurIPS 2026CausalBind: Causal Modeling and Learning for Protein-Molecule Virtual Screening
• ICML 2026Efficient Continuous-Depth Modeling with GRU Equivalents
• ICLR 2026Anime-Ready: Controllable 3D Anime Character Generation with Body-Aligned Component-Wise Garment Modeling
• CVPR 2026Continuous Exposure-Time Modeling for Realistic Atmospheric Turbulence Synthesis

All Molecular Modeling papers

1,038 papers, page 3 of 21

101. ICLR 2026Learning Collective Variables from BioEmu with Time-Lagged Generation
102. ICLR 2026Learning Flexible Forward Trajectories for Masked Molecular Diffusion
103. ICLR 2026Learning Molecular Chirality via Chiral Determinant Kernels
104. ICLR 2026Long-range Modeling and Processing of Multimodal Event Sequences
105. ICLR 2026Mamba-3: Improved Sequence Modeling using State Space Principles
106. ICLR 2026MarS-FM: Generative Modeling of Molecular Dynamics via Markov State Models
107. ICLR 2026MATHMO: Automated Mathematical Modeling Through Adaptive Search
108. ICLR 2026MesaNet: Sequence Modeling by Locally Optimal Test-Time Training
109. ICLR 2026Micro-Macro Coupled Koopman Modeling on Graph for Traffic Flow Prediction
110. ICLR 2026Modeling Interference for Treatment Effect Estimation in Network Dynamic Environment
111. ICLR 2026MolEditRL: Structure-Preserving Molecular Editing via Discrete Diffusion and Reinforcement Learning
112. ICLR 2026MolLangBench: A Comprehensive Benchmark for Language-Prompted Molecular Structure Recognition, Editing, and Generation
113. ICLR 2026MoM: Linear Sequence Modeling with Mixture-of-Memories
114. ICLR 2026Multi-Subspace Multi-Modal Modeling for Diffusion Models: Estimation, Convergence and Mixture of Experts
115. ICLR 2026MVAR: Visual Autoregressive Modeling with Scale and Spatial Markovian Conditioning
116. ICLR 2026NextQuill: Causal Preference Modeling for Enhancing LLM Personalization
117. ICLR 2026Omni-Reward: Towards Generalist Omni-Modal Reward Modeling with Free-Form Preferences
118. ICLR 2026OmniWorld: A Multi-Domain and Multi-Modal Dataset for 4D World Modeling
119. ICLR 2026On the Thinking-Language Modeling Gap in Large Language Models
120. ICLR 2026One Life to Learn: Inferring Symbolic World Models for Stochastic Environments from Unguided Exploration
121. ICLR 2026Pareto Variational Autoencoder
122. ICLR 2026Partition Generative Modeling: Masked Modeling Without Masks
123. ICLR 2026PHAT: Modeling Period Heterogeneity for Multivariate Time Series Forecasting
124. ICLR 2026Physics-Inspired All-Pair Interaction Learning for 3D Dynamics Modeling
125. ICLR 2026PonderLM: Pretraining Language Models to Ponder in Continuous Space
126. ICLR 2026Quotient-Space Diffusion Model
127. ICLR 2026Revela: Dense Retriever Learning via Language Modeling
128. ICLR 2026Revisiting Long-context Modeling from Context Denoising Perspective
129. ICLR 2026Robust Reward Modeling via Causal Rubrics
130. ICLR 2026Scalable Spatio-Temporal SE(3) Diffusion for Long-Horizon Protein Dynamics
131. ICLR 2026Scaling Laws Revisited: Modeling the Role of Data Quality in Language Model Pretraining
132. ICLR 2026Should We Still Pretrain Encoders with Masked Language Modeling?
133. ICLR 2026SoFlow: Solution Flow Models for One-Step Generative Modeling
134. ICLR 2026Steerable Adversarial Scenario Generation through Test-Time Preference Alignment
135. ICLR 2026STORM: Synergistic Cross-Scale Spatio-Temporal Modeling for Weather Forecasting
136. ICLR 2026Structural Prognostic Event Modeling for Multimodal Cancer Survival Analysis
137. ICLR 2026SynCoGen: Synthesizable 3D Molecule Generation via Joint Reaction and Coordinate Modeling
138. ICLR 2026Tackling Heavy-Tailed Q-Value Bias in Offline-to-Online Reinforcement Learning with Laplace-Robust Modeling
139. ICLR 2026Take Note: Your Molecular Dataset Is Probably Aligned
140. ICLR 2026Teaching Metric Distance to Discrete Autoregressive Language Models
141. ICLR 2026Temporally Detailed Hypergraph Neural ODE for Disease Progression Modeling
142. ICLR 2026TetraGT: Tetrahedral Geometry-Driven Explicit Token Interactions with Graph Transformer for Molecular Representation Learning
143. ICLR 2026Theoretical Modeling of Large Language Model Self-Improvement Training Dynamics Through Solver-Verifier Gap
144. ICLR 2026TopoFormer: Topology Meets Attention for Graph Learning
145. ICLR 2026ToProVAR: Efficient Visual Autoregressive Modeling via Tri-Dimensional Entropy-Aware Semantic Analysis and Sparsity Optimization
146. ICLR 2026Towards Sequence Modeling Alignment between Tokenizer and Autoregressive Model
147. ICLR 2026TrajFlow: Nation-wide Pseudo GPS Trajectory Generation with Flow Matching Models
148. ICLR 2026TriC-Motion: Tri-Domain Causal Modeling Grounded Text-to-Motion Generation
149. ICLR 2026Trust but Verify: Adaptive Conditioning for Reference-Based Diffusion Super-Resolution via Implicit Reference Correlation Modeling
150. ICLR 2026Ultra-Fast Language Generation via Discrete Diffusion Divergence Instruct

FAQ

How many Molecular Modeling papers were published at NeurIPS, ICLR, ICML and CVPR from 2023 to 2026?

1,038 in total: 137 in 2023, 207 in 2024, 321 in 2025, 373 in 2026.

How many Molecular Modeling papers are at NeurIPS 2026?

NeurIPS 2026 has 114 Molecular Modeling papers, versus 132 the year before.

How many Molecular Modeling papers are at ICLR 2026?

ICLR 2026 has 90 Molecular Modeling papers, versus 80 the year before.

How many Molecular Modeling papers are at ICML 2026?

ICML 2026 has 107 Molecular Modeling papers, versus 63 the year before.

How many Molecular Modeling papers are at CVPR 2026?

CVPR 2026 has 62 Molecular Modeling papers, versus 46 the year before.

Which conference publishes the most Molecular Modeling papers?

NeurIPS, with 351 papers from 2023 to 2026.