Interpretable Functional Koopman Learning with Non-Markovian Closure for Spatiotemporal Systems

Abstract

Precise prediction of spatiotemporal dynamics over predictive horizons is constrained by the computational cost of high-fidelity solvers and the sparsity, noise, and irregularity of data. We introduce MERLIN, a Koopman-based framework that lifts dynamics to the evolution of learned *observation functionals* with near-linear progression, enabling full-field reconstruction at arbitrary resolutions. Theoretically, we develop a functional Koopman theory for PDEs and compensate for the loss of finite-dimensional linear invariance via the Mori–Zwanzig formalism, which augments the linear backbone with non-Markovian memory terms to improve predictive accuracy. Practically, MERLIN employs discretization-invariant *function encoders* that map partial, irregular observations to observables, and resolution-free *function decoders* that reconstruct states at arbitrary query points. Training under linear constraints yields an interpretable, low-dimensional model that captures principal modes and supports reduced-order modeling, while memory correction further enables stable long-horizon rollouts even in ultra-low-dimensional latent spaces. Our code is available at: https://github.com/RobinLufdu/MERLIN.