NeurIPS 2024 Papers

The training of deep learning-based multichannel speech enhancement and source localization systems relies heavily on the simulation of room impulse response and multichannel diffuse noise, due to the lack of large-scale real-recorded datasets. However, the acoustic mismatch between simulated and real-world data could degrade the model performance when applying in real-world scenarios. To bridge this simulation-to-real gap, this paper presents a new relatively large-scale Real-recorded and annotated Microphone Array speech&Noise (RealMAN) dataset. The proposed dataset is valuable in two aspects: 1) benchmarking speech enhancement and localization algorithms in real scenarios; 2) offering a substantial amount of real-world training data for potentially improving the performance of real-world applications. Specifically, a 32-channel array with high-fidelity microphones is used for recording. A loudspeaker is used for playing source speech signals (about 35 hours of Mandarin speech). A total of 83.7 hours of speech signals (about 48.3 hours for static speaker and 35.4 hours for moving speaker) are recorded in 32 different scenes, and 144.5 hours of background noise are recorded in 31 different scenes. Both speech and noise recording scenes cover various common indoor, outdoor, semi-outdoor and transportation environments, which enables the training of general-purpose speech enhancement and source localization networks. To obtain the task-specific annotations, speaker location is annotated with an omni-directional fisheye camera by automatically detecting the loudspeaker. The direct-path signal is set as the target clean speech for speech enhancement, which is obtained by filtering the source speech signal with an estimated direct-path propagation filter. Baseline experiments demonstrate that i) compared to using simulated data, the proposed dataset is indeed able to train better speech enhancement and source localization networks; ii) using various sub-arrays of the proposed 32-channel microphone array can successfully train variable-array networks that can be directly used to unseen arrays.

Adverse weather conditions can significantly degrade the video frames, causing existing video semantic segmentation methods to produce erroneous predictions. In this work, we target adverse weather conditions and introduce an end-to-end domain adaptation strategy that leverages a fusion block, temporal-spatial teacher-student learning, and a temporal weather degradation augmentation approach. The fusion block integrates temporal information from adjacent frames at the feature level, trained end-to-end, eliminating the need for pretrained optical flow, distinguishing our method from existing approaches. Our teacher-student approach involves two teachers: one focuses on exploring temporal information from adjacent frames, and the other harnesses spatial information from the current frame. Finally, we apply temporal weather degradation augmentation to consecutive frames to more accurately represent adverse weather degradations. Our method achieves a performance of 25.4 and 33.0 mIoU on the adaptation from VIPER and Synthia to MVSS, respectively, representing an improvement of 4.3 and 5.8 mIoU over the existing state-of-the-art method.

Proteins are essential for almost all biological processes and derive their diverse functions from complex $3 \rm D$ structures, which are in turn determined by their amino acid sequences. In this paper, we exploit the rich biological inductive bias of amino acid sequences and introduce FoldFlow++, a novel sequence-conditioned $\text{SE}(3)$-equivariant flow matching model for protein structure generation. FoldFlow++ presents substantial new architectural features over the previous FoldFlow family of models including a protein large language model to encode sequence, a new multi-modal fusion trunk that combines structure and sequence representations, and a geometric transformer based decoder. To increase diversity and novelty of generated samples -- crucial for de-novo drug design -- we train FoldFlow++ at scale on a new dataset that is an order of magnitude larger than PDB datasets of prior works, containing both known proteins in PDB and high-quality synthetic structures achieved through filtering. We further demonstrate the ability to align FoldFlow++ to arbitrary rewards, e.g. increasing secondary structures diversity, by introducing a Reinforced Finetuning (ReFT) objective. We empirically observe that FoldFlow++ outperforms previous state-of-the-art protein structure-based generative models, improving over RFDiffusion in terms of unconditional generation across all metrics including designability, diversity, and novelty across all protein lengths, as well as exhibiting generalization on the task of equilibrium conformation sampling. Finally, we demonstrate that a fine-tuned FoldFlow++ makes progress on challenging conditional design tasks such as designing scaffolds for the VHH nanobody.

The arrival of Sora marks a new era for text-to-video diffusion models, bringing significant advancements in video generation and potential applications. However, Sora, along with other text-to-video diffusion models, is highly reliant on prompts, and there is no publicly available dataset that features a study of text-to-video prompts. In this paper, we introduce VidProM, the first large-scale dataset comprising 1.67 Million unique text-to-Video Prompts from real users. Additionally, this dataset includes 6.69 million videos generated by four state-of-the-art diffusion models, alongside some related data. We initially discuss the curation of this large-scale dataset, a process that is both time-consuming and costly. Subsequently, we underscore the need for a new prompt dataset specifically designed for text-to-video generation by illustrating how VidProM differs from DiffusionDB, a large-scale prompt-gallery dataset for image generation. Our extensive and diverse dataset also opens up many exciting new research areas. For instance, we suggest exploring text-to-video prompt engineering, efficient video generation, and video copy detection for diffusion models to develop better, more efficient, and safer models. The project (including the collected dataset VidProM and related code) is publicly available at https://vidprom.github.io under the CC-BY-NC 4.0 License.

The recently-proposed framework of Predict+Optimize tackles optimization problems with parameters that are unknown at solving time, in a supervised learning setting. Prior frameworks consider only the scenario where all unknown parameters are (eventually) revealed simultaneously. In this work, we propose Multi-Stage Predict+Optimize, a novel extension catering to applications where unknown parameters are revealed in sequential stages, with optimization decisions made in between. We further develop three training algorithms for neural networks (NNs) for our framework as proof of concept, both of which handle all mixed integer linear programs. The first baseline algorithm is a natural extension of prior work, training a single NN which makes a single prediction of unknown parameters. The second and third algorithms instead leverage the possibility of updating parameter predictions between stages, and trains one NN per stage. To handle the interdependency between the neural networks, we adopt sequential and parallelized versions of coordinate descent for training. Experimentation on three benchmarks demonstrates the superior learning performance of our methods over classical approaches.

Backdoor attacks aim to inject a backdoor into a classifier such that it predicts any input with an attacker-chosen backdoor trigger as an attacker-chosen target class. Existing backdoor attacks require either retraining the classifier with some clean data or modifying the model's architecture. As a result, they are 1) not applicable when clean data is unavailable, 2) less efficient when the model is large, and 3) less stealthy due to architecture changes. In this work, we propose DFBA, a novel retraining-free and data-free backdoor attack without changing the model architecture. Technically, our proposed method modifies a few parameters of a classifier to inject a backdoor. Through theoretical analysis, we verify that our injected backdoor is provably undetectable and unremovable by various state-of-the-art defenses under mild assumptions. Our evaluation on multiple datasets further demonstrates that our injected backdoor: 1) incurs negligible classification loss, 2) achieves 100\% attack success rates, and 3) bypasses six existing state-of-the-art defenses. Moreover, our comparison with a state-of-the-art non-data-free backdoor attack shows our attack is more stealthy and effective against various defenses while achieving less classification accuracy loss. We will release our code upon paper acceptance.

Forecasting a typical object's future motion is a critical task for interpreting and interacting with dynamic environments in computer vision. Event-based sensors, which could capture changes in the scene with exceptional temporal granularity, may potentially offer a unique opportunity to predict future motion with a level of detail and precision previously unachievable. Inspired by that, we propose to integrate the strong learning capacity of the video diffusion model with the rich motion information of an event camera as a motion simulation framework. Specifically, we initially employ pre-trained stable video diffusion models to adapt the event sequence dataset. This process facilitates the transfer of extensive knowledge from RGB videos to an event-centric domain. Moreover, we introduce an alignment mechanism that utilizes reinforcement learning techniques to enhance the reverse generation trajectory of the diffusion model, ensuring improved performance and accuracy. Through extensive testing and validation, we demonstrate the effectiveness of our method in various complex scenarios, showcasing its potential to revolutionize motion flow prediction in computer vision applications such as autonomous vehicle guidance, robotic navigation, and interactive media. Our findings suggest a promising direction for future research in enhancing the interpretative power and predictive accuracy of computer vision systems. The source code is publicly available at https://github.com/p4r4mount/E-Motion.

The remarkable capabilities and easy accessibility of large language models (LLMs) have significantly increased societal risks (e.g., fake news generation), necessitating the development of LLM-generated text (LGT) detection methods for safe usage. However, detecting LGTs is challenging due to the vast number of LLMs, making it impractical to account for each LLM individually; hence, it is crucial to identify the common characteristics shared by these models. In this paper, we draw attention to a common feature of recent powerful LLMs, namely the alignment training, i.e., training LLMs to generate human-preferable texts. Our key finding is that as these aligned LLMs are trained to maximize the human preferences, they generate texts with higher estimated preferences even than human-written texts; thus, such texts are easily detected by using the reward model (i.e., an LLM trained to model human preference distribution). Based on this finding, we propose two training schemes to further improve the detection ability of the reward model, namely (i) continual preference fine-tuning to make reward model prefer aligned LGTs even further and (ii) reward modeling of Human/LLM mixed texts (a rephrased texts from human-written texts using aligned LLMs), which serves as a median preference text corpus between LGTs and human-written texts to learn the decision boundary better. We provide an extensive evaluation by considering six text domains across twelve aligned LLMs, where our method demonstrates state-of-the-art results.

Recent token reduction methods for Vision Transformers (ViTs) incorporate token merging, which measures the similarities between token embeddings and combines the most similar pairs. However, their merging policies are directly dependent on intermediate features in ViTs, which prevents exploiting features tailored for merging and requires end-to-end training to improve token merging. In this paper, we propose Decoupled Token Embedding for Merging (DTEM) that enhances token merging through a decoupled embedding learned via a continuously relaxed token merging process. Our method introduces a lightweight embedding module decoupled from the ViT forward pass to extract dedicated features for token merging, thereby addressing the restriction from using intermediate features. The continuously relaxed token merging, applied during training, enables us to learn the decoupled embeddings in a differentiable manner. Thanks to the decoupled structure, our method can be seamlessly integrated into existing ViT backbones and trained either modularly by learning only the decoupled embeddings or end-to-end by fine-tuning. We demonstrate the applicability of DTEM on various tasks, including classification, captioning, and segmentation, with consistent improvement in token merging. Especially in the ImageNet-1k classification, DTEM achieves a 37.2\% reduction in FLOPs while maintaining a top-1 accuracy of 79.85\% with DeiT-small.

Large Language Models (LLMs) have demonstrated remarkable capabilities across various domains and are moving towards more specialized areas. Recent advanced proprietary models such as GPT-4 and Gemini have achieved significant advancements in biomedicine, which have also raised privacy and security challenges. The construction of specialized generalists hinges largely on high-quality datasets, enhanced by techniques like supervised fine-tuning and reinforcement learning from human or AI feedback, and direct preference optimization. However, these leading technologies (e.g., preference learning) are still significantly limited in the open source community due to the scarcity of specialized data. In this paper, we present the UltraMedical collections, which consist of high-quality manual and synthetic datasets in the biomedicine domain, featuring preference annotations across multiple advanced LLMs. By utilizing these datasets, we fine-tune a suite of specialized medical models based on Llama-3 series, demonstrating breathtaking capabilities across various medical benchmarks. Moreover, we develop powerful reward models skilled in biomedical and general reward benchmark, enhancing further online preference learning within the biomedical LLM community.

To use artificial intelligence and machine learning models wisely we must understand how they interact with the world, including how they depend causally on data inputs. In this work we develop Causal Dependence Plots (CDPs) to visualize how a model's predicted outcome depends on changes in a given predictor *along with consequent causal changes in other predictor variables*. Crucially, this differs from standard methods based on independence or holding other predictors constant, such as regression coefficients or Partial Dependence Plots (PDPs). Our explanatory framework generalizes PDPs, including them as a special case, as well as a variety of other interpretive plots that show, for example, the total, direct, and indirect effects of causal mediation. We demonstrate with simulations and real data experiments how CDPs can be combined in a modular way with methods for causal learning or sensitivity analysis. Since people often think causally about input-output dependence, CDPs can be powerful tools in the xAI or interpretable machine learning toolkit and contribute to applications like scientific machine learning and algorithmic fairness.

In this paper, we study the problem of learning the structure of a discrete set of $N$ tokens based on their interactions with other tokens. We focus on a setting where the tokens can be partitioned into a small number of classes, and there exists a real-valued function $f$ defined on certain sets of tokens. This function, which captures the interactions between tokens, depends only on the class memberships of its arguments. The goal is to recover the class memberships of all tokens from a finite number of samples of $f$. We begin by analyzing this problem from both complexity-theoretic and information-theoretic viewpoints. We prove that it is NP-complete in general, and for random instances, we show that on the order of $N\ln(N)$ samples, implying very sparse interactions, suffice to identify the partition. We then investigate the conditions under which gradient flow dynamics of token embeddings can reveal the class structure, finding that this is achievable in certain settings when given on the order of $N^2\ln^2(N)$ samples.

The in-context learning (ICL) capability of pre-trained models based on the transformer architecture has received growing interest in recent years. While theoretical understanding has been obtained for ICL in reinforcement learning (RL), the previous results are largely confined to the single-agent setting. This work proposes to further explore the in-context learning capabilities of pre-trained transformer models in competitive multi-agent games, i.e., in-context game-playing (ICGP). Focusing on the classical two-player zero-sum games, theoretical guarantees are provided to demonstrate that pre-trained transformers can provably learn to approximate Nash equilibrium in an in-context manner for both decentralized and centralized learning settings. As a key part of the proof, constructional results are established to demonstrate that the transformer architecture is sufficiently rich to realize celebrated multi-agent game-playing algorithms, in particular, decentralized V-learning and centralized VI-ULCB.

Sharpness Aware Minimization (SAM) enhances performance across various neural architectures and datasets. As models are continually scaled up to improve performance, a rigorous understanding of SAM’s scaling behaviour is paramount. To this end, we study the infinite-width limit of neural networks trained with SAM, using the Tensor Programs framework. Our findings reveal that the dynamics of standard SAM effectively reduce to applying SAM solely in the last layer in wide neural networks, even with optimal hyperparameters. In contrast, we identify a stable parameterization with layerwise perturbation scaling, which we call *Maximal Update and Perturbation Parameterization* ($\mu$P$^2$), that ensures all layers are both feature learning and effectively perturbed in the limit. Through experiments with MLPs, ResNets and Vision Transformers, we empirically demonstrate that $\mu$P$^2$ is the first parameterization to achieve hyperparameter transfer of the joint optimum of learning rate and perturbation radius across model scales. Moreover, we provide an intuitive condition to derive $\mu$P$^2$ for other perturbation rules like Adaptive SAM and SAM-ON, also ensuring balanced perturbation effects across all layers.

Diffusion models (DMs) have demonstrated remarkable proficiency in producing images based on textual prompts. Numerous methods have been proposed to ensure these models generate safe images. Early methods attempt to incorporate safety filters into models to mitigate the risk of generating harmful images but such external filters do not inherently detoxify the model and can be easily bypassed. Hence, model unlearning and data cleaning are the most essential methods for maintaining the safety of models, given their impact on model parameters. However, malicious fine-tuning can still make models prone to generating harmful or undesirable images even with these methods. Inspired by the phenomenon of catastrophic forgetting, we propose a training policy using contrastive learning to increase the latent space distance between clean and harmful data distribution, thereby protecting models from being fine-tuned to generate harmful images due to forgetting. The experimental results demonstrate that our methods not only maintain clean image generation capabilities before malicious fine-tuning but also effectively prevent DMs from producing harmful images after malicious fine-tuning. Our method can also be combined with other safety methods to maintain their safety against malicious fine-tuning further.

Multiple Sequence Alignment (MSA) plays a pivotal role in unveiling the evolutionary trajectories of protein families. The accuracy of protein structure predictions is often compromised for protein sequences that lack sufficient homologous information to construct high-quality MSA. Although various methods have been proposed to generate high-quality MSA under these conditions, they fall short in comprehensively capturing the intricate co-evolutionary patterns within MSA or require guidance from external oracle models. Here we introduce MSAGPT, a novel approach to prompt protein structure predictions via MSA generative pre-training in a low-MSA regime. MSAGPT employs a simple yet effective 2D evolutionary positional encoding scheme to model the complex evolutionary patterns. Endowed by this, the flexible 1D MSA decoding framework facilitates zero- or few-shot learning. Moreover, we demonstrate leveraging the feedback from AlphaFold2 (AF2) can further enhance the model’s capacity via Rejective Fine-tuning (RFT) and Reinforcement Learning from AF2 Feedback (RLAF). Extensive experiments confirm the efficacy of MSAGPT in generating faithful and informative MSA (up to +8.5% TM-Score on few-shot scenarios). The transfer learning also demonstrates its great potential for the wide range of tasks resorting to the quality of MSA.

Large language models (LLMs) are increasingly used in applications where LLM inputs may span many different tasks. Recent work has found that the choice of LLM is consequential, and different LLMs may be good for different input samples. Prior approaches have thus explored how engineers might select an LLM to use for each sample (i.e. _routing_). While existing routing methods mostly require training auxiliary models on human-annotated data, our work explores whether it is possible to perform _unsupervised_ routing. We propose Smoothie, a weak supervision-inspired routing approach that requires no labeled data. Given a set of outputs from different LLMs, Smoothie constructs a latent variable graphical model over embedding representations of observable LLM outputs and unknown “true” outputs. Using this graphical model, we estimate sample-dependent quality scores for each LLM, and route each sample to the LLM with the highest corresponding score. We find that Smoothie's LLM quality-scores correlate with ground-truth model quality (correctly identifying the optimal model on 9/14 tasks), and that Smoothie outperforms baselines for routing by up to 10 points accuracy.

Embeddings produced by pre-trained deep neural networks (DNNs) are widely used; however, their efficacy for downstream tasks can vary widely. We study the factors influencing transferability and out-of-distribution (OOD) generalization of pre-trained DNN embeddings through the lens of the tunnel effect hypothesis, which is closely related to intermediate neural collapse. This hypothesis suggests that deeper DNN layers compress representations and hinder OOD generalization. Contrary to earlier work, our experiments show this is not a universal phenomenon. We comprehensively investigate the impact of DNN architecture, training data, image resolution, and augmentations on transferability. We identify that training with high-resolution datasets containing many classes greatly reduces representation compression and improves transferability. Our results emphasize the danger of generalizing findings from toy datasets to broader contexts.

Efficient deployment of Large Language Models (LLMs) requires batching multiple requests together to improve throughput. As batch size, context length, or model size increases, the size of key and value (KV) cache quickly becomes the main contributor to GPU memory usage and the bottleneck of inference latency and throughput. Quantization has emerged as an effective technique for KV cache compression, but existing methods still fail at very low bit widths. Currently, KV cache quantization is performed per-channel or per-token independently. Our analysis shows that distinct channels of a key/value activation embedding are highly interdependent, and the joint entropy of multiple channels grows at a slower rate than the sum of their marginal entropy, which implies that per-channel independent quantization is sub-optimal. To mitigate this sub-optimality, we propose Coupled Quantization (CQ), which couples multiple key/value channels together for quantization to exploit their interdependence and encode the activations in a more information-efficient manner. Extensive experiments reveal that CQ compares favorably with existing baselines in preserving model quality, and improves inference throughput by 1.4–3.5$\times$ relative to the uncompressed baseline. Furthermore, we demonstrate that CQ can preserve model quality reasonably with KV cache quantized down to 1 bit.