ICML 2026 Papers

The finite symmetric group $S_n$ provides a natural domain for permutations, yet learning probability distributions on $S_n$ is challenging due to its factorially growing size and discrete, non-Euclidean structure. Recent permutation diffusion methods define forward noising via shuffle-based random walks (e.g., riffle shuffles) and learn reverse transitions with Plackett–Luce (PL) variants, but the resulting trajectories can be abrupt and increasingly hard to denoise as $n$ grows. We propose *Soft-Rank Diffusion*, a discrete diffusion framework that replaces shuffle-based corruption with a structured soft-rank forward process: we lift permutations to a continuous latent representation of order by relaxing discrete ranks into soft ranks, yielding smoother and more tractable trajectories. For the reverse process, we introduce *contextualized generalized Plackett–Luce (cGPL)* denoisers that generalize prior PL-style parameterizations and improve expressivity for sequential decision structures. Experiments on sorting and combinatorial optimization benchmarks show that Soft-Rank Diffusion consistently outperforms prior diffusion baselines, with particularly strong gains in long-sequence and intrinsically sequential settings.

Flow matching (FM) has emerged as a powerful framework for learning dynamic transport maps between two empirical distributions. However, less explored is the setting with intermediate observed marginals that can help constrain the flows between the endpoints. This "multimarginal" regime is central to modeling temporal evolution in dynamical systems in many scientific domains that can sample sequential distributions. We tackle this problem with a novel approach that leverages the connection between FM and dynamic optimal transport (OT), softly steering the flow towards the intermediate marginals through potential terms in the dynamic OT action. By extending the conditional FM learning target to incorporate these potentials, we derive an efficient, simulation-free algorithm for multimarginal FM that offers considerable flexibility in the spatiotemporal dynamics of the learned flows. We demonstrate state-of-the-art performance and training efficiency of OT-potential FM (OTP-FM) on diverse single-cell RNA sequencing, oceanographic, and meteorological datasets.

Video inpainting aims to restore missing regions while preserving spatial and temporal coherence. Diffusion-based methods achieve strong per-frame reconstruction, but their sampling implicitly generates temporally coupled latent trajectories whose long-horizon stability is not explicitly modeled, leading to a trade-off between temporal consistency and structural detail. We revisit video inpainting from the perspective of temporal trajectory stability, viewing temporal inconsistency as instability along time-indexed denoising trajectories rather than an output-level error. Based on this view, we propose an inference-time trajectory stabilization framework that monitors motion-aligned deviation and triggers risk-aware correction only when instability accumulates. It combines sparsely sampled trajectory anchors as stability references with neighborhood-consistent propagation to regulate trajectory evolution while preserving local generative freedom. Implemented as a lightweight control layer in the sampling loop, it selectively contracts unstable trajectories toward motion-consistent manifolds instead of enforcing uniform temporal constraints. Experiments show consistent improvements in temporal coherence and structural fidelity.

While recent Multimodal Large Language Models (MLLMs) have attained significant strides in multimodal reasoning, their reasoning processes remain predominantly text-centric and fail to visualize and track intermediate visual states during the reasoning process, leading to suboptimal performance in complex long-horizon, vision-centric tasks. Moving beyond the constraints of text-centric reasoning, we establish Generative Multimodal Reasoning as a novel paradigm and introduce DiffThinker, a diffusion-based reasoning framework. Conceptually, DiffThinker reformulates multimodal reasoning as a native generative image-to-image task, where the iterative denoising trajectory naturally serves as a visual reasoning path. This enables the model to track the evolution of visual information throughout the reasoning process. We perform a systematic comparison between DiffThinker and MLLMs, providing the first in-depth investigation into the intrinsic characteristics of this paradigm, revealing four core properties: efficiency, controllability, native parallelism, and collaboration. Extensive experiments across seven tasks demonstrate that DiffThinker significantly outperforms leading closed-source models, including GPT-5 (+314.2%) and Gemini-3-Flash (+111.6%), as well as the fine-tuned Qwen3-VL-32B baseline (+39.0%), highlighting Generative Multimodal Reasoning as a promising approach for vision-centric reasoning.

We introduce DualScore, a framework for correcting score functions so that score-based generative models satisfy probabilistic constraints. These constraints are specified through the marginal distribution of a stochastic transformation of the modeled variable. We formulate this as a constrained KL-minimization problem, and optimize its dual, parameterizing the infinite-dimensional dual variable with a neural network. This yields an additive correction to the original score function that can be used directly for sampling via stochastic gradient Langevin dynamics or reverse diffusion sampling, without modifying the base model. We evaluate DualScore on synthetic tasks and two real-world applications: regularized nonparametric maximum likelihood estimation and the incorporation of class-level constraints such as fairness into pretrained image diffusion models.

Plug-and-Play diffusion prior (PnPDP) frameworks have emerged as a powerful paradigm for solving imaging inverse problems by treating pretrained generative models as modular priors. However, we identify a critical flaw in prevailing PnP solvers (e.g., based on HQS or Proximal Gradient): they function as *memoryless operators*, updating estimates solely based on instantaneous gradients. This lack of historical tracking inevitably leads to non-vanishing *steady-state bias*, where the reconstruction fails to strictly satisfy physical measurements under heavy corruption. To resolve this, we propose **Dual-Coupled PnP Diffusion (DC-PnPDP)**, which restores the classical *dual variable* to provide integral feedback, progressively enforce agreement between the data-consistency and prior. However, this rigorous geometric coupling introduces a secondary challenge: the accumulated dual residuals exhibit spectrally colored, structured artifacts that violate the Additive White Gaussian Noise (AWGN) assumption of diffusion priors, causing severe hallucinations. To bridge this gap, we introduce **Spectral Homogenization (SH)**, a frequency-domain adaptation mechanism that modulates these structured residuals into statistically compliant *pseudo-AWGN* inputs. This effectively aligns the solver's rigorous optimization trajectory with the denoiser's valid statistical manifold. Extensive experiments on CT and MRI reconstruction demonstrate that our approach resolves the bias-hallucination trade-off, achieving state-of-the-art fidelity with significantly accelerated convergence. The code is available at https://github.com/duchenhe/DC-PnPDP.

Measuring single-cell protein abundance is essential for resolving biological mechanisms and disease progression with high resolution. However, due to the high costs and antibody throughput limitations of current proteomics, inferring protein levels from readily available RNA data has become a critical computational necessity. Existing regression and generative methods face a fundamental geometric bottleneck: enforcing deterministic constraints on noisy, heteroscedastic data collapses intrinsic uncertainty into a rough latent manifold, which destabilizes the learning process. To overcome this, we present scChord, a noise-decoupled conditional flow matching framework built on Probabilistic Manifold Rectification. Our approach utilizes a probabilistic decoder to disentangle technical noise and over-dispersion from the raw counts, absorbing them into distributional parameters. This allows the rectified latent manifold to focus more on biological signals, serving as a robust geometric regularizer for learning efficient transport trajectories. Extensive experiments on multiple multi-omics benchmarks demonstrate that scChord not only achieves state-of-the-art inference accuracy but also faithfully reconstructs high-fidelity biological heterogeneity and complex protein distributions.

Autoregressive (AR) image generation has recently gained momentum as a scalable alternative to diffusion models, benefiting from unified next-token prediction paradigm and strong instruction following ability. However, AR visual generation must decode excessively long sequences of visual tokens, making inference heavily bottlenecked by the memory footprint and latency of the self-attention KV cache. While KV cache compression is well studied in Large Language Model, its counterparts in AR image generation remain underexplored. The reason is fundamental: visual tokens are highly redundant, and their spatial information density is highly non-uniform. In this work, we introduce SparseAR, a training-free, entropy-aware sparse attention method that is specifically designed for AR image generation and editing. Our key insight is that information-rich regions exhibit higher entropy and require broader attention, while redundant regions show lower entropy and allow aggressive sparsification. Based on this insight, we dynamically identify information-rich regions during decoding and adaptively adjust attention sparsity to reduce KV-cache overhead. SparseAR is plug-and-play and can be readily applied to mainstream AR models. Extensive experiments on four representative AR models across multiple benchmarks demonstrate that SparseAR significantly improves inference efficiency while maintaining, and often even improving, generation and editing quality.

Existing video object removal methods predominantly rely on diffusion models following a noise-to-data paradigm, where generation starts from uninformative Gaussian noise. This approach discards the rich structural and contextual priors present in the original input video. Consequently, such methods often lack sufficient guidance, leading to incomplete object erasure or the synthesis of implausible content that conflicts with the scene's physical logic. In this paper, we reformulate video object removal as a video-to-video translation task via a stochastic bridge model. Unlike noise-initialized methods, our framework establishes a direct stochastic path from the source video (with objects) to the target video (objects removed). This bridge formulation effectively leverages the input video as a strong structural prior, guiding the model to perform precise removal while ensuring that the filled regions are logically consistent with the surrounding environment. To address the trade-off where strong bridge priors hinder the removal of large objects, we propose a novel adaptive mask modulation strategy. This mechanism dynamically modulates input embeddings based on mask characteristics, balancing background fidelity with generative flexibility. Extensive experiments demonstrate that our approach significantly outperforms existing methods in both visual quality and temporal consistency. The project page is https://bridgeremoval.github.io/.

Recent advances in generative models, such as diffusion models, have raised concerns related to privacy, copyright infringement, and data curation. Prior work has shown that training data can be reconstructed from such models, but existing attacks typically rely on substantial computational resources, access to the training set, or carefully engineered prompts. In this work, we present a low-resource reconstruction attack that operates through seemingly benign prompts and requires little to no access to the training data. Our attack targets **template-memorized images (TMI)**, where recurring layouts and visual structures are memorized during training. We show that such memorization manifests under potentially realistic usage. This raises a possibility of unintentional reconstruction by naive users that don't carry explicit adversarial intent. For example, we observe that a simple prompt such as "blue Unisex T-Shirt" can reproduce visual content depicting a real individual. Beyond extraction, we observe novel phenomena occurring in TMI (e.g., interpolation), raising questions about the novelty of generated content and the effectiveness of established methods for detecting memorized content. Our code is available at \url{https://github.com/TheSolY/lr-tmi}.

In network neuroscience, functional brain systems are often characterized using separate yet related graph-theoretic or spectral descriptors, overlooking how these properties covary and partially overlap across individuals and conditions. We anticipate that dense, weighted functional connectivity graphs lie on a low-dimensional latent geometry along which both topological and spectral structures vary smoothly at the population level. Although graph-based deep learning offers a powerful framework for modeling these brain connectomes, supervised approaches are constrained by the limited availability of labeled data. Existing unsupervised graph representation methods also typically focus on node-level embeddings, which are limited in capturing compact graph-level representations that preserve information from dense functional connectomes. To address these gaps, we learn compact brain graph representations using a graph transformer autoencoder, where domain-specific, aligned functional gradient geometry provides an inductive bias to guide learning. Despite being trained in a fully unsupervised manner, our approach meaningfully separates cognitive states and enables decoding of visual stimuli, with performance further improved by incorporating neural dynamics. In parallel, to enable generation of synthetic brain graphs, we fit a diffusion model to the learned latent representation and decode samples back to dense connectomes.

Bayesian filtering is a well-known problem that aims to estimate plausible states of a dynamical system from observations. Among existing approaches to solve this problem, particle filters are theoretically exact for non-linear dynamics and observations, but suffer from poor scalability in high dimensions. In this work, we show that diffusion-based emulators of dynamical systems can be used to implement, without additional training, an optimal variant of particle filters that has remained largely unexplored due to implementation challenges with classical numerical solvers. Experiments on nonlinear chaotic systems, including atmospheric dynamics, demonstrate that the proposed approach successfully scales particle filtering to high-dimensional settings.

Diffusion models trained on different, non-overlapping subsets of a dataset often produce strikingly similar outputs when given the same noise seed. We trace this consistency to a simple linear effect: the shared Gaussian statistics across splits already predict much of the generated images. To formalize this, we develop a random matrix theory (RMT) framework that quantifies how finite datasets shape the expectation and variance of the learned denoiser and sampling map in the linear setting. For expectations, sampling variability acts as a renormalization of the noise level through a self-consistent relation $\sigma^2\to\kappa(\sigma^2)$, explaining why limited data overshrink low-variance directions and pull samples toward the dataset mean. For fluctuations, our variance formulas reveal three key factors behind cross-split disagreement: \textit{anisotropy} across eigenmodes, \textit{inhomogeneity} across inputs, and overall scaling with dataset size. Extending deterministic-equivalence tools to fractional matrix powers further allows us to analyze entire sampling trajectories. The theory sharply predicts the behavior of linear diffusion models, and we validate its predictions on UNet and DiT architectures in their non-memorization regime, identifying where and how samples deviates across training data split. This provides a principled baseline for reproducibility in diffusion training, linking spectral properties of data to the stability of generative outputs.

Visual prostheses hold great promise for restoring vision in blind individuals. While researchers have successfully utilized M/EEG signals to evoke visual perceptions during the brain decoding stage of visual prostheses, the complementary process of converting images into M/EEG signals in the brain encoding stage remains largely unexplored, hindering the formation of a complete functional pipeline. In this work, we present a novel image-to-brain signal framework that generates M/EEG from images by leveraging the diffusion transformer architecture enhanced with cross-attention mechanisms. Specifically, we employ a diffusion transformer (DiT) architecture based on denoising diffusion implicit models (DDIM) to achieve brain signal generation. To realize the goal of image-to-brain signal conversion, we use cross-attention mechanisms to align brain signal embeddings with CLIP image embeddings. Moreover, we leverage large language models (LLMs) to generate image captions, and concatenate the resulting CLIP text embeddings with CLIP image embeddings to form unified embeddings for cross-attention alignment, enabling our model to capture core semantic information. Furthermore, we introduce a learnable spatio-temporal position encoding that combines brain region embeddings with temporal embeddings to capture both spatial and temporal characteristics of brain signals. We evaluate the framework on two multimodal benchmark datasets (THINGS-EEG2 and THINGS-MEG) and demonstrate that it generates biologically plausible brain signals.

Sampling useful three-dimensional molecular structures along with their most favorable conformations is a key challenge in drug discovery. Current state-of-the-art 3D de-novo molecular design generative models are limited to generating a single conformation. However, the conformational landscape of a molecule determines its observable properties and how tightly it is able to bind to a given protein target. By generating a representative set of low-energy conformers, we can more directly assess these properties and potentially improve the ability to generate molecules with desired thermodynamic observables. Towards this aim, we propose \textit{FlexiFlow}, a novel architecture that extends flow-matching models, allowing for the joint sampling of molecules along with multiple conformations while preserving both equivariance and permutation invariance. We demonstrate the effectiveness of our approach on the QM9 and GEOM Drugs datasets, achieving state-of-the-art results in 3D molecular generation producing valid, unique, and novel molecules with high fidelity to the training data distribution. Moreover, we show that our model can generate unstrained conformational ensembles capturing the conformational diversity and providing similar coverage to state-of-the-art physics-based methods at a fraction of the inference time. Finally, FlexiFlow can be successfully transferred to the protein-conditioned ligand generation task, even when the dataset contains only static pockets without accompanying conformations.

Modern language models have historically relied on two dominant design choices: subword tokenization and autoregressive (AR) ordering. These design decisions bake in priors that dictate a model's learning. Recently, two alternative paradigms have challenged this: byte-level modeling, which bypasses static statistically-derived token vocabularies, and masked diffusion modeling (MDM), which conducts parallel, non-sequential generation. Their intersection represents a fully end-to-end modality-agnostic generative prototype; however, removing these structural priors incurs a significant computational cost. In this work, we investigate this cost through a compute-matched scaling study. Our results reveal that the performance penalty of byte modeling is not uniform; across scale, the scaling overhead of byte modeling is worse for MDM than for AR. We hypothesize that this disparity stems from context fragility: while AR's stable causal history allows models to naturally rediscover subword patterns, the MDM objective destroys the local contiguity required to efficiently resolve semantics from raw bytes. Our findings from controlled permutation experiments suggest that future modality-agnostic designs must incorporate alternative structural biases to maintain viable scaling trajectories in the byte regime.

Diffusion language models (DLMs) offer substantial speed advantages through parallel decoding, but the lack of token dependencies limits generation quality compared to autoregressive (AR) models. Recent progress attempts to bridge the gap via importance sampling, with DLM being the proposal and AR being the target. However, due to the huge gap between their distributions, the sampling requires a large number of particles and is thus expensive to compute. In this paper, we introduce PoE-Bridge, a novel decoding framework that drastically improves generation speed and accuracy by introducing an intermediate distribution to bridge the gap. The distribution is constructed as a Product-of-Experts (PoE) of the DLM proposal and the AR target. With the intermediate distribution, we first use the DLM to draft multiple continuations in parallel, then apply rejection sampling to verify the drafted tokens and move the resulting candidates toward the PoE. We then use importance sampling to further correct the PoE-aligned candidates toward the AR target. We further propose several improved techniques, including mixed-temperature sampling for enhanced diversity and elastic rejection windows for reducing wasted verification. Empirically, PoE-Bridge achieves significantly improved accuracy with $5\times$ speedup over the standard DLM decoding approach, and recovers at least 95% of the target AR model's performance, efficiently advancing most of the quality gap on challenging mathematical reasoning and coding tasks. Our code is available at [https://github.com/juntongshi48/poe-bridge](https://github.com/juntongshi48/poe-bridge).

4D generation, or dynamic 3D content generation, integrates spatial, temporal, and view dimensions to model realistic dynamic scenes, playing a foundational role in advancing world models and physical AI. However, maintaining long-chain consistency across both frames and viewpoints through the unique spatio-camera-motion (SCM) attention mechanism introduces substantial computational and memory overhead, often leading to out-of-memory (OOM) failures and prohibitive generation times. To address these challenges, we propose Turbo4DGen, an ultra-fast acceleration framework for diffusion-based multi-view 4D content generation. Turbo4DGen introduces a spatiotemporal cache mechanism that persistently reuses intermediate attention across denoising steps, combined with dynamically semantic-aware attention pruning and an adaptive SCM chain bypass scheduler, to drastically reduce redundant SCM attention computation. Our experimental results show that Turbo4DGen achieves an average 9.7$\times$ speedup without quality degradation on the ObjaverseDy and Consistent4D datasets. To the best of our knowledge, Turbo4DGen is the first dedicated acceleration framework for 4D generation.

Diffusion policies offer a powerful and expressive parameterization for continuous control. Yet, their integration with reinforcement learning remains conceptually and algorithmically challenging. In this work, we address this gap by introducing a noisy-space action-value (Q-)function that assigns values to diffusion latents through the distribution of executed actions induced by the denoising process. We show that this construction admits a precise semantic interpretation and derive a noisy-space policy gradient (NSPG) that optimizes noisy latents using only clean action space value estimates. Building on this result, we formulate a KL-regularized policy improvement over noisy latents and show that the resulting objective admits a diffusion-compatible regression form, avoiding backpropagation through the denoising process. Empirical results on state-based D4RL benchmarks and vision-based OGBench tasks demonstrate that the proposed noisy-space objective provides a principled and effective basis for training diffusion policies in offline reinforcement learning. Project webpage: https://mahmoud-selim.github.io/NSPG/